Gene detail

Detailed information of ENSVBPP00000016614.1 in Meandrina meandrites

Genomic Location: not available for this species
NR annotation: PFX33454.1, Rho GTPase-activating protein 26 [Stylophora pistillata]
Species Meandrina meandrites · all data for this species · gene families

Sequence

CDS

ENSVBPT00000017220

ATGGGGCTTAAGCCTCTTGAATTCGAGGACTGCATCTTGGATAGTCCGTATTTCCGCGAGAACATTCATGAACATGAACGGGAGCTGGAGAGGACGAACGAGGCTATAAAGGGTCTGATCAAGGAATGCAAGGGTTTGCTGAAGGCCATTGAAAATTTATCCAGAGCACAGAGGAGTTTTGCCCAAGTGCTTAATGACTTCAGATTTGAGTGTATTGGAGAGGTGGAGACCGATGATGAAATACATATTGcTGAGGCACTAAAGGAATTTGGCAGAATGATTGACACTGTAGAAGATGAACGAGACAGAATGTTAAACCATGCAAATGCTCAGCTGATCGTACCACTGGAAACATTCAGAAAAGAACAGATTGGAGGAGCAAAGgaagaaaagaagaaatttgacAAGCAGACTGAAAAATACTGTTTAGCAGTACAAAACTACTTGAATCTTTCTTCAAAAAAGAAAGATTCAATTTTGAATGAGGTAAGGTGCTCTACTGTAAAACATGAAGCAGTGAGTAACAGTTATTACTCTCTGTATGGTATACAGTCATGTGTTCGTCATTACAGACATGAAGTATTTAATGATTATTCAGAATTCATGACTGACCTCCAGCTTAGACTTCAAAATGATTTCACACTGCTCACATTTTATTTaacacctttcttttttcaACATCAGAAAGCTCGAACTGGTGAACTTCAGTACCGTGGTGCACATACACGACAAGGATATCTTGGGGTCCAAAAGAAAGGTAGCCTTGGTACGTACACGTGGAACAAGCACTTTTGTATGTATACAAAGGAAAACAAGATTTTAACAATGATCCCGTATACACAGACTCAAGGAAGACTAGTAAGTGTTGTCAAATTTGTTGCTAGTTGTCATAGTTTTGATTACTCATTGTTTTctcaacatttctttttttggaACAGACCTCAACCCATTTTATTACAAGCACAGGATGAAGACGACAGAAAATCATGGTTAGAAGCCATGGATGGCAAAGAACCGGAAACCTCAGACCTTGAACTAACATTTATCAAGAAGTGTATTTCAGCAGTGGAAAAAAGAGGTATCACAGACCAAGGTCTTTACAGAATTGTGGGTGTAGGCTCTAAAGTTCAAAATCTTCTTTTACAATGCATCGACAAGAAGAAAGCTAAGACAGTTGACCTTGCTGATGAGGAATGCGAGTGGGAAGTGAAGACGATCACAAGTGCTCTAAAACAGTACTTAAGGAACATGCCAGAGCCATTGTTTACGTACAGCTATCACGATCAGTTCTTGGATTCAGTAAAAAAAGAGACTTATGAGAGGCGGGTAGAAGCTTTGAGGTGTCTTGTGGCTGACCTCCCTGAAGACAACAGAACGTTAATCAGAATGATTATGAAGCATTTAACCCAcgTTGCCGCGCATTCCACTAAGAATTTAATGGCAGCTAGTAACCTTGGAGTGGTGTTTGGTCCAACGTTGATGAAGTCCCGAGAAGAGTCCATGGCTGCTATCATGAACTTGAAGTACCAAAGCATTGTTATTGAGCTTCTTATCAATGAATTTAACACAATTTTTGGACCAGATCCCAGTCCAAATCCTTCTGAAGACTCAACTGACTCGTCTAATTCATTGGAGAGCACAGGGAACCCTTTAATCAGCACAGGAAATCCTTTCATTGATGAAAAGGACGATTCAACAATTACCAATGAGAAACCTAAACCTCCTCCCAAGAAGAGAAACAGCGATGAATCTGGTGCCAAACTGAATGACGGCAAGCCTGTGACACCTACAAAGCCTCTCCCCCTCCCATCTAAAGCTTACCGTGCCCCACCACCTCCAAATAAGCCAGCACCATATGCTAAGCCACGAGTCAAGGCAATTGTTGTGTCAAATTCTGAGGACGATCTAAGCAGTTTATCAGAGTCATCAAGCTCGAATTCCACTCCTCAAAGTGAAGGGAAACTGACGCTCTCTCCCAGGGAGTTTTGGAAGGAAAAAGCTAAAGATTTGCACCCATTTAGGATCCCGAAGGTGAGTTGTGTTTGTTTCTCTGTTGTCATTGTTATCATCAGGAACAACAAAGACAGCACGCCTGGTATTCGCCGTGTCAGCAGTCAGGGCGGGAGCCTTAACAGGGGGTTGCAGTCTTGGGGGACGGGTCCTCCCCCTCTCCCTCGGGAACCTCCTCCACACGAGGAGCCAACACCACCGCCTAAAACACCAAAGAAAGTCAAAACGATATATCCTTGTGTAGCAGAAAACAGTTCTGAGCTTTCATTTGATGCTGGAATGGTCATCTCTAATGCAGCTATGCCAACAGGAAAGAAGACGGTCCATTTCGTTCGTCATTATCAATCGACATGGAACGAAGCAGTGCATATTTATAAATTGTCTCGCACGGATAAGGAATTGCAGTCCGAGGCGTATTTAGATGCACCATTGAGTGCTCATGGCGAAGGACAAGCGACGAACATAAAGCAGAAAATACTGGCATTGAACGCCGAGATCGCCATAACTTCCCCTTACAGACGAACCATTGAGACCTGCCTTCGATCCTATGGGAGTCAAAATGTTGTTGTATCGCACTGGTGCGGCGAGAGAGGAGAATCACTGTGCGACATAGGAAACACAAGAGACAGCCTCGAGAAAATGTTTCCAATGCTTGATTTCAGCACGCTCCCAGCAAATGTTTGGTGGTATGTGGAAGAAGGCTTGAAAGATAAGCTgacagatcaaagaaaatgctaCGAGTGGATTTTAAGCAACGGCACTTTCTTGATGGGTGAAAAGGACGACCATCTTCAGCAGAGAATCGAGCGGTTTTATGCCTTCCTACAAAGTCGACCTGAGACCAATATCGTGGTATTTTCGCACAGTTTGTTTCTTAGAAACTTTCTTAATAAATATTACGGGCGACCAGTAACACAGTGGCTTCCAAATGGTTCCATAAACACGTATTCATTATAA

Transcript

ENSVBPT00000017220

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
B5DFQ4	Rho GTPase-activating protein 26 OS=Xenopus tropicalis OX=8364 GN=arhgap26 PE=2 SV=1
Q5U4T3	Rho GTPase-activating protein 26 OS=Xenopus laevis OX=8355 GN=arhgap26 PE=2 SV=1
Q5ZMW5	Rho GTPase-activating protein 26 OS=Gallus gallus OX=9031 GN=ARHGAP26 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002545 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16746 all species →	BAR_3	BAR domain of APPL family	Domain	Interproscan
PF00300 all species →	His_Phos_1	Histidine phosphatase superfamily (branch 1)	Domain	Interproscan
PF00620 all species →	RhoGAP	RhoGAP domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029033 all species →	Homologous_superfamily	Histidine phosphatase superfamily	Interproscan
IPR013078 all species →	Family	Histidine phosphatase superfamily, clade-1	Interproscan
IPR047225 all species →	Domain	GRAF, PH domain	Interproscan
IPR047234 all species →	Family	GRAF family	Interproscan
IPR000198 all species →	Domain	Rho GTPase-activating protein domain	Interproscan
IPR027267 all species →	Homologous_superfamily	AH/BAR domain superfamily	Interproscan
IPR036028 all species →	Homologous_superfamily	SH3-like domain superfamily	Interproscan
IPR011993 all species →	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR008936 all species →	Homologous_superfamily	Rho GTPase activation protein	Interproscan
IPR004148 all species →	Domain	BAR domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12552 all species →	OLIGOPHRENIN 1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005096 all species →	Molecular Function	GTPase activator activity	Interproscan
GO:0007165 all species →	Biological Process	signal transduction	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSVBPP00000016614.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.