Detailed information of ENSVBPP00000016673.1 in Meandrina meandrites

Genomic Location: chr8:33259423...33264662
NR annotation: XP_020610745.1, RING finger protein 150-like [Orbicella faveolata]
Species Meandrina meandrites · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q566M8RING finger protein 150 OS=Danio rerio OX=7955 GN=rnf150 PE=2 SV=1
Q86XS8E3 ubiquitin-protein ligase RNF130 OS=Homo sapiens OX=9606 GN=RNF130 PE=1 SV=1
Q5DTZ6RING finger protein 150 OS=Mus musculus OX=10090 GN=Rnf150 PE=2 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007045 (this species only)
Ubiquitin familyE3|E3 activity RING|RING · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02225
all species →		PAPA domainFamilyInterproscan
PF13639
all species →		zf-RING_2Ring finger domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003137
all species →		DomainPA domainInterproscan
IPR013083
all species →		Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR001841
all species →		DomainZinc finger, RING-typeInterproscan
IPR046450
all species →		Homologous_superfamilyPA domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46539
all species →		E3 UBIQUITIN-PROTEIN LIGASE ATL42Interproscan

 Gene Ontology
No Gene Ontology signature was recorded for ENSVBPP00000016673.1 in Meandrina meandrites.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K15692RNF13, RZF; E3 ubiquitin-protein ligase RNF13EC:2.3.2.27
Ubiquitin systemko04121deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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