Detailed information of ENSVBPP00000016887.1 in Meandrina meandrites

Genomic Location: :...
NR annotation: CAH3031037.1, unnamed protein product [Pocillopora meandrina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P49746Thrombospondin-3 OS=Homo sapiens OX=9606 GN=THBS3 PE=1 SV=1
Q06441Thrombospondin-4 OS=Xenopus laevis OX=8355 GN=thbs4 PE=2 SV=1
Q05895Thrombospondin-3 OS=Mus musculus OX=10090 GN=Thbs3 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02412TSP_3Thrombospondin type 3 repeatDomainInterproscan
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan
PF13385Laminin_G_3Concanavalin A-like lectin/glucanases superfamilyDomainInterproscan
PF05735TSP_CThrombospondin C-terminal regionFamilyInterproscan
PF12947EGF_3EGF domainDomainInterproscan
PF12662cEGFComplement Clr-like EGF-likeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR028974Homologous_superfamilyTSP type-3 repeatInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR017897RepeatThrombospondin, type 3 repeatInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR003367RepeatThrombospondin, type 3-like repeatInterproscan
IPR008859DomainThrombospondin, C-terminalInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR024731DomainEGF domainInterproscan
IPR026823DomainComplement Clr-like EGF domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10199THROMBOSPONDINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan
GO:0005576Cellular Componentextracellular regionInterproscan

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