Detailed information of ENSVBPP00000018988.1 in Meandrina meandrites

Genomic Location: :...
NR annotation: XP_020614005.1, probable 28S rRNA (cytosine-C(5))-methyltransferase isoform X1 [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q922K728S rRNA (cytosine-C(5))-methyltransferase OS=Mus musculus OX=10090 GN=Nop2 PE=1 SV=1
P4608728S rRNA (cytosine(4447)-C(5))-methyltransferase OS=Homo sapiens OX=9606 GN=NOP2 PE=1 SV=2
O9426825S rRNA (cytosine-C(5))-methyltransferase nop2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=nop2 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01189Methyltr_RsmB-F16S rRNA methyltransferase RsmB/FFamilyInterproscan
PF17125Methyltr_RsmF_NN-terminal domain of 16S rRNA methyltransferase RsmFDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001678DomainSAM-dependent methyltransferase RsmB-F/NOP2-type domainInterproscan
IPR018314Conserved_siteBacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved siteInterproscan
IPR029063Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR049560DomainSAM-dependent methyltransferase RsmB-F/NOP2-type, catalytic coreInterproscan
IPR031341DomainRibosomal RNA small subunit methyltransferase F, N-terminalInterproscan
IPR023267FamilyRNA (C5-cytosine) methyltransferaseInterproscan
IPR011023DomainNop2pInterproscan
IPR023273FamilyRNA (C5-cytosine) methyltransferase, NOP2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22807NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAININGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008168Molecular Functionmethyltransferase activityInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0001510Biological ProcessRNA methylationInterproscan
GO:0008173Molecular FunctionRNA methyltransferase activityInterproscan
GO:0000470Biological Processmaturation of LSU-rRNAInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0009383Molecular FunctionrRNA (cytosine-C5-)-methyltransferase activityInterproscan
GO:0070475Biological ProcessrRNA base methylationInterproscan
GO:0006396Biological ProcessRNA processingInterproscan
GO:0008757Molecular FunctionS-adenosylmethionine-dependent methyltransferase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14835NOP2; 25S rRNA (cytosine2870-C5)-methyltransferaseEC:2.1.1.310
Ribosome biogenesisko03009deepkoala

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