Gene detail

Detailed information of ENSVBPP00000020090.1 in Meandrina meandrites

Genomic Location: :...
NR annotation: XP_020610773.1, uncharacterized protein LOC110049321 [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSVBPT00000020979

AAGTGTGTCAATACTGCGGGTTCCTATCGCTGCGAGTGTCGCGCGGGATTTTACTTGGATTCAAATGGAAGATCCTGCTCagATCACGATGAATGTTTGATAGGCCACCATGGCTGTCAGCAGGAGTGCAACAATTTTCTTGGTAGCTACTTTTGTTCATGTCGTAACGGATATGCACTAAACAAAGACAACAAGACCTGCTCAGACGTGAATGAATGCATTGCGGTGTACGTAGCCAGTCTTAACAAAACAATAATACCTGCAGGATGTGATCAACTTTGTCATAACACGCAGGGAAATTACACCTGCAGCTGCAACCAAGGATTTCAGCTATTATATGATGGAAAACGGTGCCGAGATATCAATGAGTGCAACACGGGTGCCCATTCATGTGAACAGAACTGCCACAACACTCCTGGCTCTTACGGTTGCTCATGTTTTCATGGCTACAAGTTAAGAACAGATATGAGGAATTGTGAAGGTCTTCCTTGTGAGGCCATCATGGCTCCACCTCACGGGCGTATGAACTGCAGTGGCTTCGTAACGAATGAGACTTGTTGGTTTACATGTGAGGACGGATACGACATACAAGGCTCTGAAAAGAGAACTTGCCTGAACTCTTCAAAGTGGAGTGGTCAGCAAACCTCTTGCAATGTGAAAAATTGTGGCAGACTTTATCCGCAAGTGAATGTAAAAGTTTTCCTTCCCTGTTACACCACCTTTGGTTCTACCTGTACGCTTGGCTGCGCTGACGGACATGTTCCAATTGGGCACAATGTTGCCACTTGCCGGCTAACTAATTCAAAGACCTTCTTTTGCAAGCCTAATCCATGTCGTCATGGTGGAGAGTGCATCGTAATCAATTCGCGGAAATTTTCATGCGATTGCCAAGGCACTGGATATGAGGGCGATGTCTGCGAAACAGGTGTAGTCACGCCGCCTGATATTCCAAAACTAATTTCTGATACCCCTTCGGAGATTCTTACATTGCTAGCAAAACCTGACAATACGTTGACTGTTCAGTTTAATCCAACCACGAATTTAACCTTCGAGCCGGAAAAACTGGTAATTCAGCACCCGGCGTTTCAAGCAGAGTTTCGAGTGACAGGGCACAAGCCAGGTGTTGGAATGGTAGCCTATGATCTCCAAGGATTAGACAGGCTTAGTTTTGCTTCTCCAAAGAACAGTTCGATATTTATTGGCCACAATACATCCGATCAAGATAGTGTTTACACCAGACTGGGCTTGTTGGTCGGCGAGTTGCCAATAGGATGCCAAACGAAAAAGCTGGATATTTTCCCATGCGATGTCAGTGTGGCTTTTGATACGACCTCAACTGTGTCAAATGATGTTCTTATCGAGTCCGGACCTGTCCACATCGTTACCCCAGACAACAAGGCCATCCCTCTAAGTATAGAGGGCTATGATTTTTCTTCTCCTGAACACGCACGTCAAGAAATGCTCAAAAGACTGATAAGCCACACAAAGGTTATTGGGGAGTCGCAGCTAGGCGAAAACAAGCCGACAAACCCGGGGTGCTCTCCTTTCCATCAGACGGCGGAAACCTTAATTGAATTCATTCATAAAGACGCCTTTGCTAAGTCCTTCCTGAGATATTTTACGGGTCAAGTGCCTTTATGGTTGAAACTCATGGCTGGAGAAGAAAACGATTTATTTGCCACAGAGAACACATTTGCTTACCTTATTCAAACCACAGATAAGCAATACATCCACCCAAACTGCAAGTTTTCGTTAACTAGCAGCCCCTCTGCTGTGGTCATCTACCATCCAATGGTCAATTACAGTATTTCCGTTCAGAATGAACAGCTTTCTTTGTCAAGCAAAGGCTGCTGTTTCGCAACTGACGTTTGTGAAGGTGGAGCGTTCCTTTCGTTGTCTGAAGAAGTTAACAAAGACATTGGCATGATGCCCTTTATGAAAGACATGGCTGATGGGGGATGGAAAGTGTTCATTTCATCACTCGGTTTTACCACTCGGCGAAGATACAGCACCATCATGAATCGCGTTCCCGTTGGTCCGTGGGCTGAGTACTTCTcagattttcattataatttgtGGTGGCAAGGGAGTGCCGACATAATCTTGGAAAATTCGAGTGATTTTTCTGTGAATATAAAACAGAGTGGTGAAGCTTTTGCATTTATAGAAGACTTAGATGGCGTGAGTAcaaccttGTCTTTGGAAAGGCAGACGCAGGAAATAAAAAGAGTCCTTCTCGATGTTCAGTTGTCTGTGCCTGAGTTACAACCCGGTACACAGATTTGGTCTGCAAAGGCAGACGAAATGCTCATTAATGTCCTCAAAGCTCGTCGCCTGCTCGCCGCTTCCTCTGATTTTTTGCAGCTGAAAGTGCTTGCATCAACTATTGATGATGATCTGGACACCATATCGAGAGTATTTGATCTCCTTGTGGCCCAGTTACAGCCATACAAGAATCGAACAAGCATTGAGAGTGCAATCAATCGTTTCATCAGACTTAAGCAAGACCTCCCAAAGACCATATCTCTCTCGTTTTCCAAGTCTCCCATTCAGCAAAACTTTGTGGGTGTGCGTTTTATTCTAAATGGTCAAGTGTGCCACAAGAGGCTCTGCTTTAAGAACATGAAATGTAGCATTTGGTCCTTACGTGACAACTCTTGTGTAACGAACTCTTCGAGACAACAAGCTGTCATTGTTGAAGGAACTGCCTTGAAAGACACCTCTTTTGGTAGTGTCATAACTTATGCAGCTGGTCGACCATTAAGAATGCTAATAAGTCGTAACAACGAACCGCTCGTGACTACGTTTGAGACCCTTGTTCACTTGCTTGGATTGAAGAAGGACACAACCATAAGAATGATTGGACATGAATCGTTCTTTGCTATCAGGGCACCCATGTTTGGAAAATTTGAGGCGCTTTTGAATGTCAAAGCTGACATTGAGAACGTTGTGGACtggaaatctttaatttttcacGTGGAGGGTACAATGAACAAGTCATCGCTTCTTCATACGATGCTTGAGAACGTAATCGCAAACGAAACTGCTTTGGCTGCCACGGAGGCAACTAAAAGGTTGGCGAAAGCCCGAGCTACCTTTAATGATGCAAAAATCAAAGCAGACGCCGCCAAGGAAGTCCTGAAATTAAAGCAGGCTGCTGCGGAAGaattaaaaagagaaaaggaaaaagcCGCAGAGGAACTTCGTGTCGCACGTTTGCAATATCATCTGGCAAAGGTGCGTTTCAACAACACTGTTTACTTTCATCAAAATATCCAAAACTTCGTTTGCGAAATAAAGGAGTGCAACTATACTTGCTTTAATGGTTGCGTTATCCCAGACCTCTGCCAGGACCCAATTAACATTACGTATCTTGATCGGTATTGTGACACTATTAACAAGCCCATTACAATCCACGTTGTAGAGCAGAGAACAGAAACACGCCGTTTTGAAGTTGCGACGTATCAAACCATATACACTGGTAACTGCAAATCGGGAGTCTCCTTGAAGAAAATATATGACTATGCTAAAATAGGAtttaaaattggaaaatttgttGGAGGACTTGTGGGAGCGGCATTTGGAGGAGTCGGGGCTGTCGGATATTTCAGTAAGAAAATATTTGGTTGCTCCAATACTTACGAAAGAGTGCCAGCTGAGCCGCGACTGGTTGAGTACGAACACAAAGTATTTGAAGCAAAAGCAGTTGAGAAGATAATCAAGGAAGTAAAGTGCACAAGCCAGGAAGAAAAGACGAAACACGGTGGATATGGTCCCCCTTACTCTTGCTGCAAGAAATACGGATGCCAAACTAAAGTGTTAGACCATCGTTGTGTTGTGAGTAATGAAAGATGTTTAGTAGCCATGACTGAGGTAAAATTCACACTTGAGGCCATGAATGAAACGTTTCAATCTGCATTCCTATCCTTAAGCAATTCTGTTGATGAAGTGAAGAAGGCAACATCTGTTTACGAGAAGGCCAGAATCCGTCACGAGTTTGCAGTTAGCGTGTTAAATAAGGTAAAGGCATACACGAAGCAGCGTCTGTCAGCGGTAGAGATTGTCAATGCTTCCATGCTTCATGTGCGAGGAATGGTTAACTTTGGCTTGAAAATAGCACAAGCTATAAACGCCTCAAATTCGGATAACAAGAAAGCTGTCGATGTTGGAGAGATGAAATTTTCCTTTTCCATGACATCCGAAGACATCAAAAAGATCGTTTTTCAAACTGATGTTAGCTCTGCAAATGGTCAACAAAATGCTGTCAGTTTTCTGGTTGACTTCGACCAAGTTGAGCGTTCAGTTAGTTCAGCATCCAGGATAATAATTGCCAAATTATTTGGAAGCAAGCACTCAAAGAGAAAACGATCGACTCTCGAAGAAAAAAGCGACCAAGCAAATTCCACACATTCTTTTCATTCCAGCCTTACCGACTACCCGTATGCATGCCTGTTTGCCAATACAACACACCTATATTTAAGATCCATTTTTCAATCACTAGGAGACCTGATTTCTTCAGTCAAGGGATTAAACGTAAGCCTATCCTCTGGATACCGTGATCTTGAAAGAATGGCTGAGACAGTTCATCTTAGCAATTTGACGTCCAATAACTCATCAGTAAATATTACCTCGGGACATCCAAACAGCTCGTTCGTGTCCGAATACATGGAAATGATAGAGGTCATGAAGGACGAAAGCAACAAGTTGGCCAATGACTCGACGCAATCTTGGAATGACACTCTGGAGGCTTGGAGGGCGTTTCTTGAGGCTTTCACTTCGAATAATGGATTTGAAGAATGTTCTGGCACTGAAGACTGCATCGACTACTTTTTTGAAGGAGTAAAGGAATTTTACGAGTTTGAAGACAGTCCAAGGGCTCTGGTGATTAAAGACGCTATTCCTCAGCTCAGAGAAGTGGTAAAGTCGTTAACAACTGCTGACTTAACACTAGTCGAAACTGAACGAACTCTCCATCAGGCTGCCTCATTACTGAACAAAACTCGCGACGATTCAGTTTTGTGTGGAGGAAGACCAGTCATAACCTCTTCCTCTCAAAAAGAAGTTATTCTTTTGCCCGGAGACAGTCTGTTGTTACGTTGTACTGCTAAAAGTGAAGCGGAGTTAAAATATGCTTGGAGGAGAAATGATAAGCTGATCGAGGAATCACTGGATGGAACATTCTATGAACGCGCCGTCAGCAAACGACACGAGGGTGCTTATGTTTGCGTTGTGTCAAATAACAAAGGTAGCACATATTCCAATGTGACGATTGTTAAAGTTCATAGCAAGCCCAGCATCACTCAACACCCACAGCCACAAAGGGTGGTAGTTGGAAGTCAAATGCCTGCGACTTTTATTTGCAATGCAACGGGCCAGCCAACTCCCAGTTTTCAGTGGTTCTTTCAATCAACCAACTCATCTGTCACCAAAGTTAATAACACCAAACCTGTGTTATATATGACAAACCCTCGCCGTCATCACGAAGGCTATTATTACTGTGAGGTATCTAACGTGCATGGTTCAGCGGTCAGCGAAAAGGCCCGACTAGACGTGTTGGGTTACACCATTGGTCTCCCAAGGTTGCTCATTGCCCTAAATCTTACTTCCCACTGCTTGCTGACGGCGAATTCCTCCAACAGCTCCACCGTGCAAGATCCACTTCCATGTGACAATGATTCCATAGCTGAATTACCGTCATCGATAAATGAAAACATGACTGGTGATATTGTTCATTCACTGGCAAGTTCGCTTAATGTATCGGTTGAGCTAATCTCTGGCTTTGACTACGACTCAAGAAATACCTCGACGGCTTCCATAGCATTCATAGTAGATATCGACAAGGAACGTTGGAAGGACGAAAATTTTGCGTCGTACATAGAAATTGTAGAAACCCTTGCTGATGTTAAGGCTAACCTGCTTGAGAAACTGGAACGGTTCAATTCAGACGTACTAAACAAGACCTTTAAGGTGCCTTGGAACACCACTACTCTTGTAGGAGAACCTGGAAGCCTTATTGCCTACCCGTTATCTCCGGAATGTCCCGAGGGACAGGCTCTCAGTGAAAATGGTTACATTTGTGGTAAGTTATATGGTTTTGACTCCTTTTTCTAA

Transcript

ENSVBPT00000020979

Protein

ENSVBPP00000020090.1

KCVNTAGSYRCECRAGFYLDSNGRSCSDHDECLIGHHGCQQECNNFLGSYFCSCRNGYALNKDNKTCSDVNECIAVYVASLNKTIIPAGCDQLCHNTQGNYTCSCNQGFQLLYDGKRCRDINECNTGAHSCEQNCHNTPGSYGCSCFHGYKLRTDMRNCEGLPCEAIMAPPHGRMNCSGFVTNETCWFTCEDGYDIQGSEKRTCLNSSKWSGQQTSCNVKNCGRLYPQVNVKVFLPCYTTFGSTCTLGCADGHVPIGHNVATCRLTNSKTFFCKPNPCRHGGECIVINSRKFSCDCQGTGYEGDVCETGVVTPPDIPKLISDTPSEILTLLAKPDNTLTVQFNPTTNLTFEPEKLVIQHPAFQAEFRVTGHKPGVGMVAYDLQGLDRLSFASPKNSSIFIGHNTSDQDSVYTRLGLLVGELPIGCQTKKLDIFPCDVSVAFDTTSTVSNDVLIESGPVHIVTPDNKAIPLSIEGYDFSSPEHARQEMLKRLISHTKVIGESQLGENKPTNPGCSPFHQTAETLIEFIHKDAFAKSFLRYFTGQVPLWLKLMAGEENDLFATENTFAYLIQTTDKQYIHPNCKFSLTSSPSAVVIYHPMVNYSISVQNEQLSLSSKGCCFATDVCEGGAFLSLSEEVNKDIGMMPFMKDMADGGWKVFISSLGFTTRRRYSTIMNRVPVGPWAEYFSDFHYNLWWQGSADIILENSSDFSVNIKQSGEAFAFIEDLDGVSTTLSLERQTQEIKRVLLDVQLSVPELQPGTQIWSAKADEMLINVLKARRLLAASSDFLQLKVLASTIDDDLDTISRVFDLLVAQLQPYKNRTSIESAINRFIRLKQDLPKTISLSFSKSPIQQNFVGVRFILNGQVCHKRLCFKNMKCSIWSLRDNSCVTNSSRQQAVIVEGTALKDTSFGSVITYAAGRPLRMLISRNNEPLVTTFETLVHLLGLKKDTTIRMIGHESFFAIRAPMFGKFEALLNVKADIENVVDWKSLIFHVEGTMNKSSLLHTMLENVIANETALAATEATKRLAKARATFNDAKIKADAAKEVLKLKQAAAEELKREKEKAAEELRVARLQYHLAKVRFNNTVYFHQNIQNFVCEIKECNYTCFNGCVIPDLCQDPINITYLDRYCDTINKPITIHVVEQRTETRRFEVATYQTIYTGNCKSGVSLKKIYDYAKIGFKIGKFVGGLVGAAFGGVGAVGYFSKKIFGCSNTYERVPAEPRLVEYEHKVFEAKAVEKIIKEVKCTSQEEKTKHGGYGPPYSCCKKYGCQTKVLDHRCVVSNERCLVAMTEVKFTLEAMNETFQSAFLSLSNSVDEVKKATSVYEKARIRHEFAVSVLNKVKAYTKQRLSAVEIVNASMLHVRGMVNFGLKIAQAINASNSDNKKAVDVGEMKFSFSMTSEDIKKIVFQTDVSSANGQQNAVSFLVDFDQVERSVSSASRIIIAKLFGSKHSKRKRSTLEEKSDQANSTHSFHSSLTDYPYACLFANTTHLYLRSIFQSLGDLISSVKGLNVSLSSGYRDLERMAETVHLSNLTSNNSSVNITSGHPNSSFVSEYMEMIEVMKDESNKLANDSTQSWNDTLEAWRAFLEAFTSNNGFEECSGTEDCIDYFFEGVKEFYEFEDSPRALVIKDAIPQLREVVKSLTTADLTLVETERTLHQAASLLNKTRDDSVLCGGRPVITSSSQKEVILLPGDSLLLRCTAKSEAELKYAWRRNDKLIEESLDGTFYERAVSKRHEGAYVCVVSNNKGSTYSNVTIVKVHSKPSITQHPQPQRVVVGSQMPATFICNATGQPTPSFQWFFQSTNSSVTKVNNTKPVLYMTNPRRHHEGYYYCEVSNVHGSAVSEKARLDVLGYTIGLPRLLIALNLTSHCLLTANSSNSSTVQDPLPCDNDSIAELPSSINENMTGDIVHSLASSLNVSVELISGFDYDSRNTSTASIAFIVDIDKERWKDENFASYIEIVETLADVKANLLEKLERFNSDVLNKTFKVPWNTTTLVGEPGSLIAYPLSPECPEGQALSENGYICGKLYGFDSFF

Uniprot

Uniprot term	Description
Q4LDE5	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 OS=Homo sapiens OX=9606 GN=SVEP1 PE=1 SV=3
P0C6B8	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Svep1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00084	Sushi	Sushi repeat (SCR repeat)	Domain	Interproscan
PF13927	Ig_3	Immunoglobulin domain	Domain	Interproscan
PF12662	cEGF	Complement Clr-like EGF-like	Domain	Interproscan
PF13895	Ig_2	Immunoglobulin domain	Domain	Interproscan
PF00008	EGF	EGF-like domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003598	Domain	Immunoglobulin subtype 2	Interproscan
IPR000436	Domain	Sushi/SCR/CCP domain	Interproscan
IPR007110	Domain	Immunoglobulin-like domain	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR000742	Domain	EGF-like domain	Interproscan
IPR003599	Domain	Immunoglobulin subtype	Interproscan
IPR000152	PTM	EGF-type aspartate/asparagine hydroxylation site	Interproscan
IPR035976	Homologous_superfamily	Sushi/SCR/CCP superfamily	Interproscan
IPR001881	Domain	EGF-like calcium-binding domain	Interproscan
IPR052080	Family	von Willebrand factor C/EGF & Fibrillin	Interproscan
IPR036179	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR018097	Conserved_site	EGF-like calcium-binding, conserved site	Interproscan
IPR009030	Homologous_superfamily	Growth factor receptor cysteine-rich domain superfamily	Interproscan
IPR026823	Domain	Complement Clr-like EGF domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47333	VON WILLEBRAND FACTOR C AND EGF DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005509	Molecular Function	calcium ion binding	Interproscan