Gene detail

Detailed information of ENSVBPP00000020121.1 in Meandrina meandrites

Genomic Location: :...
NR annotation: KAJ7393250.1, hypothetical protein OS493_006219 [Desmophyllum pertusum]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSVBPT00000021011

GTTATTTACCGGTTGATAAGCAAGGTTATATTATGCACTGAAGTAATGGGGAACTGAAGTATACTTCACGGAGATGTAATCGTCGACATTTTCAGTTATTGACTTTGCCATCCCCATGTGGAAAAACATTTTCCATGTTGTTTAACATCAAGAGGGATAAGAGCAGCCGCGACACCATGCTCAAATTATGGGATGCCGATACTGGGCGAGAGATGAGGAGCATGGGCGGACATACGGGAACTATAACATCGGTTTTTCTTTTACCAAAAAAGGACATGACGTCATGCGATGTGCCGTCCAGCTTTCGAACTGACCAGTACTCTGTGCTCACGGGCTCAAAAGATTGCTCCATGAAAATCTGGTCCCTCGCTAGCGGTCAGATTAAGAGGTCTATGTATGCCTTTTCGCCCGTGGAGTGCCTCGACTGCAACAGGAATCTAACTGCAGCTGGACTAGatggCGGTAAAGTTGAGCTTTGGGACCTGGAGACCGGAACAATTGTGAGGTCAGTGCGCGGCCATGATGAAGATGCTGTCACGGCTGTCAAGTTTCAGGACGAGCGTGTGATCAGTGGCTCGGCCACAGGGGTGGTGAAGGTCTGGGACATCCGGGACAATTCCCTCAAGCCAGTGATGAGTTCGGACCAGGCCCCTGTGGACCAAGCTGACGCGGGCGTGACAGTCAAACCAAGACGAGTGCGTTGCTTAGCAACATCACAGGAAACAGTTTACTGGGGAGATGATGGGGTTAACATTAAGGCGATGGACTTAAATTCAGGTAAACTTCGTAAGCTTCGTAATCACGTGACAGAGTTCGGATCGACTGGTGCCATGGCGACCGCGGGCTCATGTCTTGTGAGCGCAGGGTATGATCTGGACCGAGGAAATGGATACTTGAATGTTCGCAGCCTTCCCTCAGAGGAATACCTAGCAACCGTGGATGACGAAAGCACAGGAAGCATCACGTGCTTGTCATGCACGCAGACAACACGTGATCAAGTGACCCTACACAGGATGTGCACAGGAGGACTGGAGCTGAAACTCTGGGATCAGCTGCCGAGTTCAAAGGTCAAGAAACGTTCAAGACCGGAAGCAGACGATGTCTACGTCGCAGCCAAGCACGTCCGTCGCTACAGCCAACCGGATGTAAGCGACACAGAGAGCAGCGAAGATGAAGACGACCAACCGGAAGGGGACGACtctgatgacgatgatgacgtCAGTACTGTCGGAAGTACGTCACGGTCTTGGTGTACGATATCCTGATGACGTGCTCACGAAGATTGCAATGTGACACAATGATCCTCTTCTTCAACTGGGATAGATACACAGAAACAAAACCAACCGATCGAATtctccctccccaccccccgtGGGAAAGATGTTAGAGTATCGAGATGCTCTAGTGATCACTGGCAGTCGAATGCAAGCAAATGACATCTCTTTTTCTTATTCACTTTCCCAGTCATTAGAGTTGACAGTGACACTGAAAAAGCGAATCATATCAAGGGTGATCTAAGGAGCTAGATTGACCTTAAACGAACGAGATTTCTCGATAGTGAATCagttttgtatttatatttctcAAGAGATTCATACTCTCTTGTATTTCTCTGGCAAGTCGAGGTTCAACTTGGGCCGTCTGTCGTTAGCCGTTTGTCCGTGAAAGGAAATAGTTTTCCTATTTTGTGTAAGTAGTTTTTTCGCATTTTTTCTAATGGATtgtttaaaaattaaacaaaatcagCGGACCTGCAGCTTGCCGTAGAATGTCTTGCTTAAATTCTCTATTATCTCGGCTTGTTTCATGGCAGTTTTGTACATGTTAAAGGGTTTCGTATGGAATGCAACTTTTTGTATCCGTGGTTTTTGACGGACAAATTTTACAGACACGAATTATTTCAGGCCTGGATTCTTTATCTCGCGCGAATGGAATTTTAGATATTTGAAGTCCTCAAGGtaactgaaataaaagaaaatttaaaatcgtgAA

Protein

Uniprot

Gene family

Uniprot term	Description
A7TNS8	CCR4-associated factor 4 homolog OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294 / BCRC 21397 / CBS 2163 / NBRC 10782 / NRRL Y-8283 / UCD 57-17) OX=436907 GN=CAF4 PE=3 SV=1
Q9SYX2	Protein SUPPRESSOR OF PHYA-105 1 OS=Arabidopsis thaliana OX=3702 GN=SPA1 PE=1 SV=1

Gene family	Subfamily
Ubiquitin Family	UBD\|Other\|Beta-prp
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|CDC20
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|DWD

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00400	WD40	WD domain, G-beta repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001680	Repeat	WD40 repeat	Interproscan
IPR036322	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19879	TRANSCRIPTION INITIATION FACTOR TFIID	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005669	Cellular Component	transcription factor TFIID complex	Interproscan
GO:0006367	Biological Process	transcription initiation at RNA polymerase II promoter	Interproscan
GO:0016251	Molecular Function	RNA polymerase II general transcription initiation factor activity	Interproscan