Gene detail

Detailed information of ENSVBPP00000021177.1 in Meandrina meandrites

Genomic Location: not available for this species
NR annotation: KAJ7383745.1, hypothetical protein OS493_026276 [Desmophyllum pertusum]
Species Meandrina meandrites · all data for this species · gene families

Sequence

CDS

Transcript

ENSVBPT00000022071

AATATACGACTAAGTTTTGAAAATGTAGGGTAAGATGGGGTAGTCGATTTACCGCCGAAGGAATTTTTCTGACCGTTTGTCCAGTTAAACCACTTTTGTTTGGTGATTCAGACAGCCGATATCACTGACCGATATGCAGCTAAGATTTCTGTTTGGATACAACCTGTTTATCTTTGCCGGCAGTTTGGTCATACATATACACTGTGAACAAATATGTAGGGCAGATCAGTACACTGTTGTCGCATCAAATGGCAGCTTTTTATATTGCTTAAATTGTGGAACTTGTCATCGTGGGCGTGGATTGGATCCTCCATGTGGTAGAAGCATTCCACATCCACCCATTGTTGAATGCAAGGTCTGCCCTTCTGGAACATTCTCTGCTGAACTTGACTCAGCGCCGTGTCACAGTTGTCAGCATTGTGCAAAGCATGAATTAATAGCTGCTCCTTGCACAAATGGGTCTGACAGAATTTGCAACGGAACATGTGAGAAAGGATATTTCTATTCCAAAAAAGACTCTACTCACAGCTGTCAGACATGTTCTTACTGTTGCTTTGATGGAAAGGATGAGGAAGTGTCTGAGTGTGCAAACCAAGGCTTGAATGCTTCCAAACAGCATTGTCGTCCTAGGCCAGACAAGGATTGTAGTCGTGATCCATCACCTACAGATCGAACAAATGAAACTAAAGCTTCAAAAAGTTACGGCATCATCATTGGTGTGACTGGCGCTGTGGCTGTCATAGTTGTGATTGTGCTAATTATATTGTACAGGTactgcaaaaagaaaaatacatgtatgcatcTGCCAGGGCATGGATCAGCAGAAGAAGGGAGTGAAAGAACAAATTcaACACATGATTATGTTAGTAACGGTCCACAGGCAGACTCCTCAGATACCAGTAAGGTAACATTTGAACTGCCCAACAAGGATGTAGTTCCTGAAGATAATCATGGCCTTGAGAAATCAGCTCTTGAGCAAAAGCATGGTGAAGCTGCTGCTTCCCATGCAAACCAAGCTAATGGCCAAGTTGTGAAATTGCCAGATGCTAAAAAGAGTCGTAGGCCTTCCTTTAATCGTCAAAGCAGCCAAGACTCACAAAACAGTGGAGATGGAGAGGTTGGATTCAGGAAGCGCAGTAACTCAACACGAAGTTATGAGAAGTTGAAAAGGAAATTGTCTGAAAGAGATGATTCTCTTTTAGAAGAGGAACCAGATGAGATACATGACCCAATAAAAATAGTCAAGCAGCCTATTAAAtctcaaaaacaaaaagaaggtTCAAGAGTGGAATTCAAGTTGAAGGCCCAAGGAAGCAGCAGTTTATGGTACCAGTGGTTTAAAGATGGTGTCGAATTATCAGAAGAAAACAATGCCAGTCTTATTCTTGAATGTATTAAGCTGCGTGATTTTGGCTGTTACACATGTCGAGTGAGCTACCAAGATGGTTACGGGGATATTAAAGAATCGTCCTCTGCAGTACTGGATGTCATCCCTCAACGCCAAAATGGAATGAGACCCAAACTTCTTCAGGAAGTAGATCTAAACACCCGCGATGAAATTGCATCTCTACTTGAGAACAAGCGATATAGCCTTGGGGGTTGCAGACAGGTAGCTGCTAAATTCGGCATGAAAGAAGACAAAATAGGAGCTCTAGTCAATTCCAGGGAACCAGGAAAAGATGTTATGGAGTTCCTGATGGGATCCAAACCAGACCTGACTGTTTACAGTTTCTGTAAGGTACTAAAAGACGATAAAATTGAGCGTTTTGATATTGTTAAGCTCCTGGAGGATCACTTTTTGATTCGAGATGGAGCTACGTACCTGTAAGTTTGCAGACATGTCAAGATGCAAGATACTTTATAGTTAAAATTTAACCTCTCTGCAAAGGCCAAGCTATGGCAATTTTAAAACATGTATGTTAAGAGTAAGGATTATGACTTGTGCATGGGCAGACATTTGAGTTTGGCCACTATCAAGAGGTATGGGTTACTGGAAGGTAAAGGCATAAGTGGAAGTTCAACTGCTGTAAATTGGAAATAAATGCATTTTTACCTTTGTTAATTAATTAGACATTTCTTGTTGGTGTGTTAAGTTTCACCATTCTCTTGTTGGTTCTAAAAAATGGTCATTTCAGTATCGAAATTTTTACTCTTGTAACTAAAAGTGAAACtatgtttcgtttcaaaaaagctTCCACCAGTATGCTTATAGCTTTTGGCTACTATCAAAATTGTCGTTTTCCACCAAACAGTTATTACGCTTATTACTTACACAATAAGCACCCTATGTAGCCTGCAAGGTTTCGCCCGAGTTCTTTGTTTCGGTCGCAGAACCATTAACGAGTATGGCGAAGCCGCTAGGAGCTCGAGTATGAGGAATAGTCAACTTGATTTCCACTAGTATTGTAATTAAATTATATAGTTGGTAAAGGACTTGTAGAACAAGttaaaaaaacagttttacttaaaaaaacagtttaaattATATAGTTGGTAAAGGACTTgtaaaacaagttaaaaaaaaacagttttaccTAATTGACAAAATAATGATAGTTGATGAAAGATTTTaggaaattatttttaatagtgACTGGCATTTGAAGTACAACTTTTTGCACTGCTAAAGGGAAAAAATAGAAATCTCAATTGTGAAATTTTGGAGACCCGTTAACTTGACCGGTGTAAAGATTTGTTATTCTCGAGTACTGGTCTCCGTACATGGCTTATGTATGCACTACTAGGTAGGAGAATACTGTATGATtcaattattttaaattaaaggAGTTATGTCGCAGAAGATGCAActtgaaaacttgtttttttt

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000593 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13927 all species →	Ig_3	Immunoglobulin domain	Domain	Interproscan
PF00020 all species →	TNFR_c6	TNFR/NGFR cysteine-rich region	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001368 all species →	Domain	TNFR/NGFR cysteine-rich region	Interproscan
IPR013783 all species →	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR007110 all species →	Domain	Immunoglobulin-like domain	Interproscan
IPR047526 all species →	Family	Tumor necrosis factor receptor superfamily member 19/27/EDAR	Interproscan
IPR011029 all species →	Homologous_superfamily	Death-like domain superfamily	Interproscan
IPR036179 all species →	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12120 all species →	TNFR-CYS DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0038023 all species →	Molecular Function	signaling receptor activity	Interproscan
GO:0043123 all species →	Biological Process	positive regulation of canonical NF-kappaB signal transduction	Interproscan
GO:0046330 all species →	Biological Process	positive regulation of JNK cascade	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSVBPP00000021177.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.