Gene detail

Detailed information of ENSVBPP00000023790.1 in Meandrina meandrites

Genomic Location: :...
NR annotation: XP_020622006.1, collagen alpha-1(XXIV) chain-like [Orbicella faveolata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
A4IFW2	Receptor-type tyrosine-protein phosphatase F OS=Danio rerio OX=7955 GN=ptprf PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01391	Collagen	Collagen triple helix repeat (20 copies)	Repeat	Interproscan
PF13927	Ig_3	Immunoglobulin domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036179	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR003598	Domain	Immunoglobulin subtype 2	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR050632	Family	Nematode Cuticular Collagen	Interproscan
IPR008160	Repeat	Collagen triple helix repeat	Interproscan
IPR007110	Domain	Immunoglobulin-like domain	Interproscan
IPR003599	Domain	Immunoglobulin subtype	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24637	COLLAGEN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
-	-	-	-

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K13884	MARCO; macrophage receptor with collagenous structure	-	Membrane trafficking	ko04131	deepkoala