Detailed information of ENSVBPP00000023921.1 in Meandrina meandrites

Genomic Location: :...
NR annotation: XP_020627768.1, probable ATP-dependent RNA helicase YTHDC2 [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
B2RR833'-5' RNA helicase YTHDC2 OS=Mus musculus OX=10090 GN=Ythdc2 PE=1 SV=1
Q5R7463'-5' RNA helicase YTHDC2 OS=Pongo abelii OX=9601 GN=YTHDC2 PE=2 SV=2
Q9H6S03'-5' RNA helicase YTHDC2 OS=Homo sapiens OX=9606 GN=YTHDC2 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21010HA2_CHelicase associated domain (HA2), ratchet-likeDomainInterproscan
PF00023AnkAnkyrin repeatRepeatInterproscan
PF07717OB_NTP_bindOligonucleotide/oligosaccharide-binding (OB)-foldDomainInterproscan
PF04146YTHYT521-B-like domainDomainInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF04408HA2_NHelicase associated domain (HA2), winged-helixDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR007275DomainYTH domainInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR011709DomainDEAD-box helicase, OB foldInterproscan
IPR007502DomainHelicase-associated domainInterproscan
IPR048333DomainHelicase associated domain (HA2), winged-helix domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR18934ATP-DEPENDENT RNA HELICASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0004386Molecular Functionhelicase activityInterproscan
GO:0005622Cellular Componentintracellular anatomical structureInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K20099YTHDC2; ATP-dependent RNA helicase YTHDC2EC:5.6.2.6
Spliceosomeko03041deepkoala

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