Gene detail

Detailed information of ENSVBPP00000024892.1 in Meandrina meandrites

Genomic Location: chr2:19485433...19500807
NR annotation: XP_020626846.1, uncharacterized protein LOC110064180 [Orbicella faveolata]
Species Meandrina meandrites · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ENSVBPT00000025934

ATGGATGGTAATATACAGTTGAACACTGCAGGGCATAACAAGCTCATTAACAAAAGCATTCCTGTGACAGAAAAATGTGTAGAGGCAAGTCAGAGTGGAAATGTAGAGAGCTTACCAGAGTGGGTTCCAGCCTCAGAACTTGATAAAGCATTCTCTGCTGCTGCAAAGGAAACTACAGAGTCCACCAAAGACCATAACCCCATTACACTAACATTTCCAAGAGTTAGCTTGCCAAGTACAAATCCTTTTGCAAAAGACCTGGCAGCTCAGGAATATGGACATGGTGAAGTTAATGCAGATAGTGTGTTAAACTATGGCCTGGAGCAAACACCGCAGTACTCTTTATTTGGACCTCCCAGTTCACCAAGCTTGTCACAGGGTGCAAGACCCAAAGAGGTCAAGGCTTACCAAGATACTGGCCATGTTGGTAGTGCAACTAACCCATTTGCTCCTGATTTAACTCCTAAGAAACAAGGAAGAAGACAAGAACAAAGGCCTGCAGATTCCACTGAGGTAGTCATTGCAGCAGAAGTGCATACATCTGTAGGGCAGCCTACAGAAATAAACAGAGCACAACACAAGTCTCACAGACGTAGGTTGTCTAGCGAGTCCATGGTTACACTTATCGAGACCTCCTATGCTGACACATCTGTTAGCTCTTTTGAATCACTGGGTGCTGATGAACCACCAAAAATAGCCAAAGTGGAAGTCCAGAAGCCTCAACCACAACAGGAAAGTAAAGAGACCAGCCAAGCCACTGACAAGCCAAAAATACAAGTGcctgGAAAAGTGGCTCCTTTCTGGATACCTGATTGTGTGTGCTTCAACTGTACTGGCTGCAACATAAAATTTACTCTTTTCATCAGAAAACATCACTGTAGAGGTTGTGGAAAGATATTTTGTAACAGCTGTTGTTCACAACTGGCCAGATTTCCGTACATGGATTTCAAGATTGGTAGAGTTTGTTCTTCATGTGCAGATGCTATAAGAGAAGTTTCTcgtttaaagaaaaaagaagattCATCAAAACCAAGTCCTTCACAGCAATCAACCAAAAAAGACCATGGAGCTGCAACAACACCTGGGTTGCAGACTGGAAAATCGTATGCACCACAGACTAGACCACAACCTCAACATGTCATGGTTACTAATGCTCAGACACAGAGAAATCCAACCACTCCTTTATCTGCGCAGACACAAAGATCAGCAGTGCCATCAGCTGCTGCTGTGCCATTAAATCAGGGATTGCCGAGAAGTGTGTCAAACCAGCCTGTCCAGTACCAGCCACTAACATGGCCACCAAAGTCAACTGTTGCAACACCAGTGCCTTTGGCAACTCCATCTGCTGTTGTTGTTCCATTAAATCAGGGAGTGCAGGGTAGTGTGTCAAACCAGCCTGTCCAGTACCAACCTCTAGCATGGCTGCCAAAGTCAACTGCACAGGTTCAAAATTCGGCAACAGCAGTCCCTGGTCTTATGCCATCAAATCAGCTTCATCAGGGGCCCCAGGGTCCTGTCGCACCAGCAAAACCAGCAAATCAGTACATGTGGGTGCCAGCTTCTGCCATTCAGCAAAACATGCCAATGGTTTATGTGAACCCTGTTGCACCTAGTTTACAGGGTGGACCAGTGTTTGTCAGCTATCCCCAAACAGGGCAGCTCATTCCACAGCAGGCGCCAGTTATGCTGATGTCTAGTCAGCCATCTTCGACTTCACGCTTACCTCACACAACAATGCAGACTGCAATTACAATAACGAGTGGAAGTGGGAAGGGAGTAACCCCAGTTTCAAACAGACCTTCAGCCGGGACAGTGACAACTTTCAGTGTCTTGCCACAAAATGTTGGACAGTCAGCTGTGCAGTCTGCTCAGAGGCATGATATTGGAAAGGCGAGACAGCCTGCGGCTGCTGTAAATCAATCTTCTATCTATGGCAGTTCACTACCATCAAGCAGCAAACCACCAGTTGCAGCCTCCTTTCCCCAATCAAGTCATCAAACTACGTCTGTAACAAGTCAGCTACCTTCCACTGGCCTTCCACTCACCTCTTCACTTCAACAGTCCTCATCTCATCCTGTTAACACTCCTGCATCATCCCAGAGACTGCCCAATGCTGCGCGAAGCAGCCCCAATGAGAGAAGTCAATCTGAATTAAATTCTCAGACTACATCAGTACGAAGTCAGCTGCCTTTCACTGGCCTTCCACTCGATTCTTCAGTTCATCAGTCTTCACCACCCTCTGGAATTACTGCATCACCATCCCAGGGAATGCTTGGTGCTGTGGTAAGCAGCTCCAGTGAGACAAGACAATCCCAAGAAAGTCTTAGTGGAAGCCAGCAGTCCAGGGAATCAGATGGCAGTGTCCTCGTTGCTGATGAAAGTGACATAAGTGCAAAGGATTTCCATCTGCCATTAAGAAGAGCAGGAAGGACTATCACCTGGCGTTACAGGACACAGGGGAAGAGTAAACTACAAGAGCAGAGGAAGTCTTTGGCAAAGGATTTAAGAGATTTACCAAATGGAATAACAGTTCAGGCTTCTCAAGACCTCTTAGTTCATGTCAAGAAAGTGAAATTGAAGGAAGGAGAGCGAGTCATTCCCTTGTGGTGCTATCAAAGTGAGGGACTCAACAAGTTCAATCATTTGGAGGTAGTGGTTATGTTGGAAACAAGGAAAAAGGAAGATATCTTCCCAGAGGAAGTGCTACGAGTCTACAGAGGCATTTTACATCTTGCCACAAAATTGGATAACCATTTTGAACATGGCAACTACTTATCAAGCAACAATCAGTTTCTTGATGGCAGTGACGATGCCGGCTTTATTTTTGTCTCTAGTGAGCTAAAGCCTAAACCTCTTGCATTAAAAGAAATGCAGTCACCTTTCTTGTATGCCATTTTGGTAAAACGATCTGAGCTCTCTGCTGCCATGTACACACCAAGCAGGCTTCTCCTTCGACTGGGAAATAAAATGCACAGTTATCCATTTCCACTGTGGAACAATCGAGACCGAAGACCTATAAATCTTGGTAACGAGCAAGAAGACAGGTTCTTCCACACTTTGTTTGCCATGAACAAGTACTTGAAAAACAGTGTACCTGAGGCCATGATTCCAGGTCTTTATGTGGTGAAAGAAgacaataaaattattcttcaagTCCCAAACAGTGGTCAGAGTGCGATTGTGGGTCTGTTGGATCGTCTCGTAAAAAAAGAAGAACAAACAGCTACTGTGCCGCTATTGGCTGATATACCGCCATATGTGGATAACTGTAAGATTGTAGTCTACAATGAGCGCGGAGGAAATACCGTACAGTCATTCGGAAACGCAGCAAACAAGTCAGTCGTAGGTCTTAGTTTTCTGCTGCTTCATCTTGGCGTGGATGCTTCTTCGCCTCTCAGCTTTGGAGGGGAGCTTTTAGATGATGGTGTGCTGGTTTTCTTCTCTAAGTCCCACACGCAAAAGCTCCGTGAAAGCTTGGCAGCGAAAACCAACTGTTATTTCTTCCTGGGCGATAAATTTAATATCGCACACTTCGAGCTGCGTTGGGTGCGAGACGTTAACTATCATGAATTGCCAAAACCGACGAAAAACAATTCTCAGAAAACGACGGCTGACCAGTCTCCGGCAACGATCATTGCCGATACAACAGAAAAAGAGCCTGGGACCGATTCTTATCTAGGCACTGCAACGATTGATATTCGGTACTCGGGCTATGGAAATGAGGTTGAAGTTCTGAAGAAAGTGTTTGATGACTTTGGCAAGATCCTGCATGTCTTGGAGGGTAACATTCGGCTAGCGTGCACCGATCCACTCATGAAACACGCGACTAAGATGAAGTCTGGTGAGAGTCAGGAGCTACAGCTTCGTGTGGTGCTGAGGTCAAGTTACAAGAAATGGTCGGTAGGCCCCAGTGATCTTCCCACGGCTCTTATCAGGTCTCTTCAGATGGCTCTGCACACGGTCAAGGTTCCCGTGGTGTTCGAAGGGGAACTGGTGATGAGTTTTGATGTCAGCGTTGTCAAGCAATAG

Transcript

ENSVBPT00000025934

CGACAAACCCATCTTAGTCCTTCAACCTGTCCCATCATCAACTCAATCAACAAGTAATAATGACAGCATTGCAGGGGTAGAAAATGGTGCTGTCAAGGCTTCAGTACCAATTATTTTACCTTTGGCATCACCTGTTATTGACAAGGCAACAAAAGATGCAATTTTTCAGCAGATAAATGGGGTAGGTACATTTCCGTCCAGTGAAGGTCATGACGAAGAATGCGAATCTAAAGCTTCCTCTCATGATGTGCCGCAACAAAATGGCATGGATGGTAATATACAGTTGAACACTGCAGGGCATAACAAGCTCATTAACAAAAGCATTCCTGTGACAGAAAAATGTGTAGAGGCAAGTCAGAGTGGAAATGTAGAGAGCTTACCAGAGTGGGTTCCAGCCTCAGAACTTGATAAAGCATTCTCTGCTGCTGCAAAGGAAACTACAGAGTCCACCAAAGACCATAACCCCATTACACTAACATTTCCAAGAGTTAGCTTGCCAAGTACAAATCCTTTTGCAAAAGACCTGGCAGCTCAGGAATATGGACATGGTGAAGTTAATGCAGATAGTGTGTTAAACTATGGCCTGGAGCAAACACCGCAGTACTCTTTATTTGGACCTCCCAGTTCACCAAGCTTGTCACAGGGTGCAAGACCCAAAGAGGTCAAGGCTTACCAAGATACTGGCCATGTTGGTAGTGCAACTAACCCATTTGCTCCTGATTTAACTCCTAAGAAACAAGGAAGAAGACAAGAACAAAGGCCTGCAGATTCCACTGAGGTAGTCATTGCAGCAGAAGTGCATACATCTGTAGGGCAGCCTACAGAAATAAACAGAGCACAACACAAGTCTCACAGACGTAGGTTGTCTAGCGAGTCCATGGTTACACTTATCGAGACCTCCTATGCTGACACATCTGTTAGCTCTTTTGAATCACTGGGTGCTGATGAACCACCAAAAATAGCCAAAGTGGAAGTCCAGAAGCCTCAACCACAACAGGAAAGTAAAGAGACCAGCCAAGCCACTGACAAGCCAAAAATACAAGTGcctgGAAAAGTGGCTCCTTTCTGGATACCTGATTGTGTGTGCTTCAACTGTACTGGCTGCAACATAAAATTTACTCTTTTCATCAGAAAACATCACTGTAGAGGTTGTGGAAAGATATTTTGTAACAGCTGTTGTTCACAACTGGCCAGATTTCCGTACATGGATTTCAAGATTGGTAGAGTTTGTTCTTCATGTGCAGATGCTATAAGAGAAGTTTCTcgtttaaagaaaaaagaagattCATCAAAACCAAGTCCTTCACAGCAATCAACCAAAAAAGACCATGGAGCTGCAACAACACCTGGGTTGCAGACTGGAAAATCGTATGCACCACAGACTAGACCACAACCTCAACATGTCATGGTTACTAATGCTCAGACACAGAGAAATCCAACCACTCCTTTATCTGCGCAGACACAAAGATCAGCAGTGCCATCAGCTGCTGCTGTGCCATTAAATCAGGGATTGCCGAGAAGTGTGTCAAACCAGCCTGTCCAGTACCAGCCACTAACATGGCCACCAAAGTCAACTGTTGCAACACCAGTGCCTTTGGCAACTCCATCTGCTGTTGTTGTTCCATTAAATCAGGGAGTGCAGGGTAGTGTGTCAAACCAGCCTGTCCAGTACCAACCTCTAGCATGGCTGCCAAAGTCAACTGCACAGGTTCAAAATTCGGCAACAGCAGTCCCTGGTCTTATGCCATCAAATCAGCTTCATCAGGGGCCCCAGGGTCCTGTCGCACCAGCAAAACCAGCAAATCAGTACATGTGGGTGCCAGCTTCTGCCATTCAGCAAAACATGCCAATGGTTTATGTGAACCCTGTTGCACCTAGTTTACAGGGTGGACCAGTGTTTGTCAGCTATCCCCAAACAGGGCAGCTCATTCCACAGCAGGCGCCAGTTATGCTGATGTCTAGTCAGCCATCTTCGACTTCACGCTTACCTCACACAACAATGCAGACTGCAATTACAATAACGAGTGGAAGTGGGAAGGGAGTAACCCCAGTTTCAAACAGACCTTCAGCCGGGACAGTGACAACTTTCAGTGTCTTGCCACAAAATGTTGGACAGTCAGCTGTGCAGTCTGCTCAGAGGCATGATATTGGAAAGGCGAGACAGCCTGCGGCTGCTGTAAATCAATCTTCTATCTATGGCAGTTCACTACCATCAAGCAGCAAACCACCAGTTGCAGCCTCCTTTCCCCAATCAAGTCATCAAACTACGTCTGTAACAAGTCAGCTACCTTCCACTGGCCTTCCACTCACCTCTTCACTTCAACAGTCCTCATCTCATCCTGTTAACACTCCTGCATCATCCCAGAGACTGCCCAATGCTGCGCGAAGCAGCCCCAATGAGAGAAGTCAATCTGAATTAAATTCTCAGACTACATCAGTACGAAGTCAGCTGCCTTTCACTGGCCTTCCACTCGATTCTTCAGTTCATCAGTCTTCACCACCCTCTGGAATTACTGCATCACCATCCCAGGGAATGCTTGGTGCTGTGGTAAGCAGCTCCAGTGAGACAAGACAATCCCAAGAAAGTCTTAGTGGAAGCCAGCAGTCCAGGGAATCAGATGGCAGTGTCCTCGTTGCTGATGAAAGTGACATAAGTGCAAAGGATTTCCATCTGCCATTAAGAAGAGCAGGAAGGACTATCACCTGGCGTTACAGGACACAGGGGAAGAGTAAACTACAAGAGCAGAGGAAGTCTTTGGCAAAGGATTTAAGAGATTTACCAAATGGAATAACAGTTCAGGCTTCTCAAGACCTCTTAGTTCATGTCAAGAAAGTGAAATTGAAGGAAGGAGAGCGAGTCATTCCCTTGTGGTGCTATCAAAGTGAGGGACTCAACAAGTTCAATCATTTGGAGGTAGTGGTTATGTTGGAAACAAGGAAAAAGGAAGATATCTTCCCAGAGGAAGTGCTACGAGTCTACAGAGGCATTTTACATCTTGCCACAAAATTGGATAACCATTTTGAACATGGCAACTACTTATCAAGCAACAATCAGTTTCTTGATGGCAGTGACGATGCCGGCTTTATTTTTGTCTCTAGTGAGCTAAAGCCTAAACCTCTTGCATTAAAAGAAATGCAGTCACCTTTCTTGTATGCCATTTTGGTAAAACGATCTGAGCTCTCTGCTGCCATGTACACACCAAGCAGGCTTCTCCTTCGACTGGGAAATAAAATGCACAGTTATCCATTTCCACTGTGGAACAATCGAGACCGAAGACCTATAAATCTTGGTAACGAGCAAGAAGACAGGTTCTTCCACACTTTGTTTGCCATGAACAAGTACTTGAAAAACAGTGTACCTGAGGCCATGATTCCAGGTCTTTATGTGGTGAAAGAAgacaataaaattattcttcaagTCCCAAACAGTGGTCAGAGTGCGATTGTGGGTCTGTTGGATCGTCTCGTAAAAAAAGAAGAACAAACAGCTACTGTGCCGCTATTGGCTGATATACCGCCATATGTGGATAACTGTAAGATTGTAGTCTACAATGAGCGCGGAGGAAATACCGTACAGTCATTCGGAAACGCAGCAAACAAGTCAGTCGTAGGTCTTAGTTTTCTGCTGCTTCATCTTGGCGTGGATGCTTCTTCGCCTCTCAGCTTTGGAGGGGAGCTTTTAGATGATGGTGTGCTGGTTTTCTTCTCTAAGTCCCACACGCAAAAGCTCCGTGAAAGCTTGGCAGCGAAAACCAACTGTTATTTCTTCCTGGGCGATAAATTTAATATCGCACACTTCGAGCTGCGTTGGGTGCGAGACGTTAACTATCATGAATTGCCAAAACCGACGAAAAACAATTCTCAGAAAACGACGGCTGACCAGTCTCCGGCAACGATCATTGCCGATACAACAGAAAAAGAGCCTGGGACCGATTCTTATCTAGGCACTGCAACGATTGATATTCGGTACTCGGGCTATGGAAATGAGGTTGAAGTTCTGAAGAAAGTGTTTGATGACTTTGGCAAGATCCTGCATGTCTTGGAGGGTAACATTCGGCTAGCGTGCACCGATCCACTCATGAAACACGCGACTAAGATGAAGTCTGGTGAGAGTCAGGAGCTACAGCTTCGTGTGGTGCTGAGGTCAAGTTACAAGAAATGGTCGGTAGGCCCCAGTGATCTTCCCACGGCTCTTATCAGGTCTCTTCAGATGGCTCTGCACACGGTCAAGGTTCCCGTGGTGTTCGAAGGGGAACTGGTGATGAGTTTTGATGTCAGCGTTGTCAAGCAATAGTACTTCATGTCACAGTCTTTTTTGACTGgtattactgtattttaagaaAATACTCTGAGATTAGTTTACAAATATCGGATTATTTTGGTGCGTATACAACATGTAAAATGACCGCCAATTAGAACATATTTTACTTAGAAAATAATTTGATATGCAGTCTTAAAAGGAAATGGAAAGAGATCATTTCTTCATTCAGACACATTATAGTGACTTACAAGTAGTTTAAAAGAGAGGAGTTTCTCTGTAGCTTAAAGTAATAAGACGGTGTAAGAGAAAGTTCCTGTATTtaataagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaaaaaagaaaagaaagaaagaaagaaagaaagaaagaaagaaaggaagaaagaaagaaagaaagaaagaaagaaaatagcAAAGCGTTATCAAagtaaacaactgaagcaataACAACTAACCATATGGTTCAAAAGCTAAGTGCGGCGATGCAAGCTTCCCTTTTGTAAACGGCCGATGACATTTTAACGACAATTTTTCTCTAAAAAATATGCATGGACGTTTACCATTTGTCATGAAAAACCAGAGTTTTCGATTGAAAAATCAAATGATACAGCTCATTCCAGTGAAAACGTTCCGTAAAAAATTTAAATCCTCAAACGTATTCCTTTTTTTCCATTCCATGCGAAATGACTGGAAAATCTCTGTCATTTGTCAAGCcccacttgcgccagcctcgcGCTGGAATTTAGCAGTACCGCTAGGACCGTTCCCCTCCGACGGTCGTCTCGTTCAAATGGTAAACTCCCCGAACTAGCCAAACCGCTTCGAACTGTAAGGAATTTGGCATTACCACTGGGACTGTTCCGTTCCGACCGGCTTTTCGAGCAAATGATAAACCTC

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9BQ24	Zinc finger FYVE domain-containing protein 21 OS=Homo sapiens OX=9606 GN=ZFYVE21 PE=1 SV=1
Q8VCM3	Zinc finger FYVE domain-containing protein 21 OS=Mus musculus OX=10090 GN=Zfyve21 PE=1 SV=2
D3ZVP7	Zinc finger FYVE domain-containing protein 21 OS=Rattus norvegicus OX=10116 GN=Zfyve21 PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008738 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF11979 all species →	SARA_C	Smad anchor for receptor activation-like, C-terminal	Domain	Interproscan
PF01363 all species →	FYVE	FYVE zinc finger	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000306 all species →	Domain	FYVE zinc finger	Interproscan
IPR022557 all species →	Domain	Smad anchor for receptor activation-like, C-terminal	Interproscan
IPR013083 all species →	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR011011 all species →	Homologous_superfamily	Zinc finger, FYVE/PHD-type	Interproscan
IPR017455 all species →	Domain	Zinc finger, FYVE-related	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46319 all species →	ZINC FINGER FYVE DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0046872 all species →	Molecular Function	metal ion binding	Interproscan
GO:0016197 all species →	Biological Process	endosomal transport	Interproscan
GO:0031901 all species →	Cellular Component	early endosome membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSVBPP00000024892.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.