Gene detail

Detailed information of ENSVBPP00000025347.1 in Meandrina meandrites

Genomic Location: :...
NR annotation: XP_020602582.1, uncharacterized protein LOC110041581 [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSVBPT00000026426

ATGGATTCAGGAGATCCAGCTTTCCTCTCTTTGCTGCTCTCGATTGGCCGGGAACTAACCGATGACGATTTCGAGAACTTGAAGTTTTTATGCGAGGGGACGATTCCAGCCAGTCATCTCGAGGACGTCAAGCGACCTCGCGAACTTTTTCTGGAGTTGATTCACTGCTGCGACCTGAGCGATGAGAATAAGGACCCACTTTCTTCTTTACTCTTCCACATTGGGCGACACGACCTCAGGAATCGGCTCCTTGGAGTGGAAGGAGGTGCTGTCACTAAAGCTTTTAAGTACTTGGGTGGAATCCCCTGCAAAGTGCCAAATTTTGTGGGGCGTAAAGGACAATGTGCTACCATAATGGAGAAACTTACTGCAAGTGATTCCTGTCAGATAGTTTCCGTCACTGGACCGCCTGGTTTCGGCAAGTCTGCAGTAGCCATCCAAGTGGGACATGAACTGATAGGGCAACGAAAAACAAGTGTGTACTACATCTCATTACGAAATTTGACATCACTGAATGGCATGGTGAACTCCCTCCTTGGCGCTCTGCAAATTGTGGCTGGCAGAGAACCTATCCAGCAGGCTAAGCATTGCTTATGCACATTAACTAAACATTCTGTTATTATTCTAGACAATGCGGAGGACATGTTACTTCCCAAAGTAAAAGATGAATTCTGCCATTTCATTGAAGCTGTCGCAGAAACTGCTGCTCTTGTGAAAATCCTGATCACGTCACGTCAATCCATCACATTTTTTTCAGTGGAAATGTTTGAGCTTCGGCTAGACTCTCTTTGCCCCGACCATGCAAAGGAGTTGCTTCTGACACTGGAGTCCAGAGTGTCTGAGAAGAATGCAGAACAGTTGGCACATCACTGTGGTGGAGTGCCATTGGTTCTTCGCACAACTGCAGCTCTCCTGGCCAAGGGAGTTGATGCTGGTGCTCTAATAAATGAATTCCAGATGAGTCCAGTTTCAACCCTGAAGTCTTTCAGTCTTAATTCACTGTCCCACAATCATCAGCTCTTTAACTGTCTTGGAATCTGTTTCAGCCGCCTTGAACCCGACCAGCAAGTTGCTCTTATATCCTTAGCAGTGTTCCCCATGTCTTTTACGGTTGCCGATGCCCAGTTTCTACTTAGAGACCTGTCCGAATATAAACTGGGGATGCTGCTTCAAAACCTTGTGGATAACTCCATGCTCCAGTTCGATTGTTTGTTCAGACAGTATTACGTCCATAACATCATCCAGTCTTTCTGCATTGATCGTGCACAGCAAGAGTCCAATTTGTATCCAACCTACCAATCTGCCAAAAAATTGTTCAACACTCACTATCTAGGCATGTTAAAAGAACTGTATGCAACCTTCCTGTCCAAGGAATGCTGTCATGCAGTATCAAAGTTCCTTATCAATAGGCTCAACATGAGGCAGGCCTTGCAAGGCTCACTAAATGACCCTGACTTAGGTGAGATGTGCATCGACACAGCCATTGATGTTACTCCTTTCTTGGTTAAGGTGTTCAGGAAAGAGAAGTTTCTCTCAGTTTTTGGCAAATTCACAGAGGCATGCAAAAGAAGTGGAGACCGGAAGAGGTACAGCGACTGTTTGACGTCAGAGGCATACTGCATCCTTTCCCACTGCGCATGTCATCTTCCCTGTCCATCGGCCGTTGCCAAGTTCAAGGAGGCTGACAAGGTGCAAAGAGAGCTTGGTGATGACTCATCTCTTGTGCGTGCCTTTTGTTTGAGTAAACTCGGCCGTTGCTTTGGACAGTCCAAAGATTTGGAAAAAGCCATCCCACTCATAAGAAAGGCCATTGACATCAGAGAGAAAGTTCACAAGGACAGGATTTTTACTGCAGTTGCTTATAAAGATCTTGGAGCTGCCTATGCATTCAATGAAGCACACCAAGAAGCCAATAAATTCAGGTCAGAGTTTTCACTTCCAGTGTATCTAGAGTTGCTAGGAGACCATCCCTTTACTGCCACTCTGATGGATGATATGGGAAAGTCGTACCAAGCTCTTGGAGACTACGAAAATGCAATAAAGTTCTTACGTGATGCATTGCACATGAGAAAACACTCATTGGGTGATCACCAAGAAACAGCACGTTCTTTCCATGGTCTTGGCAAGGCTTTGGCCATCCAAGGACAATTGAATGATGCTCTGGATGCCCTGAAGAGTGCACTGACCATTCAGGACAAGGTTCTGGGAAATCATCAGGAGACCGTACGTTCCCACCATGAGATAGCCCATGTGCTTAAGAGGCTTGGACGAGATGAGGAAGCAAAAAATGAGGAACTGCTAGCTAATGAAAGGTCCTTATCTATTGTTGAGCCACAACCTGAGAAATGA

Transcript

ENSVBPT00000026426

TGTGATCATTGAGGGCATCTTTATCAGTTTAATCCCTCATGGATTCAGGAGATCCAGCTTTCCTCTCTTTGCTGCTCTCGATTGGCCGGGAACTAACCGATGACGATTTCGAGAACTTGAAGTTTTTATGCGAGGGGACGATTCCAGCCAGTCATCTCGAGGACGTCAAGCGACCTCGCGAACTTTTTCTGGAGTTGATTCACTGCTGCGACCTGAGCGATGAGAATAAGGACCCACTTTCTTCTTTACTCTTCCACATTGGGCGACACGACCTCAGGAATCGGCTCCTTGGAGTGGAAGGAGGTGCTGTCACTAAAGCTTTTAAGTACTTGGGTGGAATCCCCTGCAAAGTGCCAAATTTTGTGGGGCGTAAAGGACAATGTGCTACCATAATGGAGAAACTTACTGCAAGTGATTCCTGTCAGATAGTTTCCGTCACTGGACCGCCTGGTTTCGGCAAGTCTGCAGTAGCCATCCAAGTGGGACATGAACTGATAGGGCAACGAAAAACAAGTGTGTACTACATCTCATTACGAAATTTGACATCACTGAATGGCATGGTGAACTCCCTCCTTGGCGCTCTGCAAATTGTGGCTGGCAGAGAACCTATCCAGCAGGCTAAGCATTGCTTATGCACATTAACTAAACATTCTGTTATTATTCTAGACAATGCGGAGGACATGTTACTTCCCAAAGTAAAAGATGAATTCTGCCATTTCATTGAAGCTGTCGCAGAAACTGCTGCTCTTGTGAAAATCCTGATCACGTCACGTCAATCCATCACATTTTTTTCAGTGGAAATGTTTGAGCTTCGGCTAGACTCTCTTTGCCCCGACCATGCAAAGGAGTTGCTTCTGACACTGGAGTCCAGAGTGTCTGAGAAGAATGCAGAACAGTTGGCACATCACTGTGGTGGAGTGCCATTGGTTCTTCGCACAACTGCAGCTCTCCTGGCCAAGGGAGTTGATGCTGGTGCTCTAATAAATGAATTCCAGATGAGTCCAGTTTCAACCCTGAAGTCTTTCAGTCTTAATTCACTGTCCCACAATCATCAGCTCTTTAACTGTCTTGGAATCTGTTTCAGCCGCCTTGAACCCGACCAGCAAGTTGCTCTTATATCCTTAGCAGTGTTCCCCATGTCTTTTACGGTTGCCGATGCCCAGTTTCTACTTAGAGACCTGTCCGAATATAAACTGGGGATGCTGCTTCAAAACCTTGTGGATAACTCCATGCTCCAGTTCGATTGTTTGTTCAGACAGTATTACGTCCATAACATCATCCAGTCTTTCTGCATTGATCGTGCACAGCAAGAGTCCAATTTGTATCCAACCTACCAATCTGCCAAAAAATTGTTCAACACTCACTATCTAGGCATGTTAAAAGAACTGTATGCAACCTTCCTGTCCAAGGAATGCTGTCATGCAGTATCAAAGTTCCTTATCAATAGGCTCAACATGAGGCAGGCCTTGCAAGGCTCACTAAATGACCCTGACTTAGGTGAGATGTGCATCGACACAGCCATTGATGTTACTCCTTTCTTGGTTAAGGTGTTCAGGAAAGAGAAGTTTCTCTCAGTTTTTGGCAAATTCACAGAGGCATGCAAAAGAAGTGGAGACCGGAAGAGGTACAGCGACTGTTTGACGTCAGAGGCATACTGCATCCTTTCCCACTGCGCATGTCATCTTCCCTGTCCATCGGCCGTTGCCAAGTTCAAGGAGGCTGACAAGGTGCAAAGAGAGCTTGGTGATGACTCATCTCTTGTGCGTGCCTTTTGTTTGAGTAAACTCGGCCGTTGCTTTGGACAGTCCAAAGATTTGGAAAAAGCCATCCCACTCATAAGAAAGGCCATTGACATCAGAGAGAAAGTTCACAAGGACAGGATTTTTACTGCAGTTGCTTATAAAGATCTTGGAGCTGCCTATGCATTCAATGAAGCACACCAAGAAGCCAATAAATTCAGGTCAGAGTTTTCACTTCCAGTGTATCTAGAGTTGCTAGGAGACCATCCCTTTACTGCCACTCTGATGGATGATATGGGAAAGTCGTACCAAGCTCTTGGAGACTACGAAAATGCAATAAAGTTCTTACGTGATGCATTGCACATGAGAAAACACTCATTGGGTGATCACCAAGAAACAGCACGTTCTTTCCATGGTCTTGGCAAGGCTTTGGCCATCCAAGGACAATTGAATGATGCTCTGGATGCCCTGAAGAGTGCACTGACCATTCAGGACAAGGTTCTGGGAAATCATCAGGAGACCGTACGTTCCCACCATGAGATAGCCCATGTGCTTAAGAGGCTTGGACGAGATGAGGAAGCAAAAAATGAGGAACTGCTAGCTAATGAAAGGTCCTTATCTATTGTTGAGCCACAACCTGAGAAATGATTTGTTTGCATTAATGTAGTCACAAGAAAATGGGTGACCTGTAAACCACTCAGCTTACAATGTACCTTAGTGGCAAGCTCTTAGATGTAGCACTATGTACATCTTGGGATTTATTTTAGGCAATGTTACTTGTTAGGCATGATTCAATCCACAAAGCTTTTTTTAGTGACATGTCATTGGTCAAAATACGTTTATGGCACCTCATTGTCAGATGGTGTTTGAAAGTAATTTATAGAGAAACAAAGTTTCAAGGGCAATTACATTGTAAGCATCTGAAAGCTTTGTCAGCCTTGAATGTAGTTCTTTATTGTGGTTAcccctgcccctcccctcccgccccactccccccaccccactccacCCATCATGAGTAGAATTAGCCCCCTATCAAAATTAAGGGCAGGGTCAATTGCTCACGCACAACAAACACTGTATCAGTAGATGTGTGTATGAGTTATCATGACCAGAGATGGGATGGAAAAGCATTGGCAACTCTGACAGCTTCTGATTGCAATTGAGATTGAGTTGTTCCAGAAGAAATCCACACTCCCCTGGCAGATGGCTGGTGTTTTGGACCGGCACTGTTTTCCAGGACTCctagcctcccccccccccccccccccccgaccccCCGAAACACCAAAAGTCACACTTATACtttacaaatattaataatatattataaatataaaattatgaGTATCAGCTGGTACAGCAATGTAGAAAATAATGTTTTAAAACCACGGAATGAAGCTGTTGTCTATAGCAGGTTTTCTAA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00931	NB-ARC	NB-ARC domain	Domain	Interproscan
PF01335	DED	Death effector domain	Domain	Interproscan
PF13374	TPR_10	Tetratricopeptide repeat	Repeat	Interproscan
PF13424	TPR_12	Tetratricopeptide repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011029	Homologous_superfamily	Death-like domain superfamily	Interproscan
IPR002182	Domain	NB-ARC	Interproscan
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR019734	Repeat	Tetratricopeptide repeat	Interproscan
IPR001875	Domain	Death effector domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47691	REGULATOR-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0043531	Molecular Function	ADP binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0042981	Biological Process	regulation of apoptotic process	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K24172	CAND2, TIP120B; cullin-associated NEDD8-dissociated protein 2	-	Ubiquitin system	ko04121	deepkoala