Detailed information of ENSVBPP00000027761.1 in Meandrina meandrites

Genomic Location: :...
NR annotation: PFX16472.1, Collagen alpha-1(VI) chain [Stylophora pistillata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
D3YXG0Hemicentin-1 OS=Mus musculus OX=10090 GN=Hmcn1 PE=1 SV=1
Q8WZ42Titin OS=Homo sapiens OX=9606 GN=TTN PE=1 SV=4
Q6V4S5Protein sidekick-2 OS=Mus musculus OX=10090 GN=Sdk2 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08005PHRPHR domain DomainInterproscan
PF07679I-setImmunoglobulin I-set domainDomainInterproscan
PF01391CollagenCollagen triple helix repeat (20 copies)RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR003599DomainImmunoglobulin subtypeInterproscan
IPR012983DomainPHRInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR013098DomainImmunoglobulin I-setInterproscan
IPR038648Homologous_superfamilyPHR domain superfamilyInterproscan
IPR008160RepeatCollagen triple helix repeatInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45774BTB/POZ DOMAIN-CONTAININGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005829Cellular ComponentcytosolInterproscan
GO:0022008Biological ProcessneurogenesisInterproscan

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