Gene detail

Detailed information of ENSVBPP00000028282.1 in Meandrina meandrites

Genomic Location: chr3:10686283...10696712
NR annotation: CAH3117281.1, unnamed protein product [Porites lobata]
Species Meandrina meandrites · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

ENSVBPT00000029484

tggCAAACACTTTATTTTTGTGCTGACACGGTGATCTTGTAATGGAAAATTCCTTGACGATTTCTTTAAACAGATGAAATATGCCAGAATATGTTCAAAAGAGGGTTACGGTGCTTGTCAAGGGAAAGGATGCGGGAAAGgTGATTGCTGTTCCTGATACTCTTGAGGAATTCCTCCTAAGAGTTCAGTGCAAGCTTGGGCTCCAAACACCAGTCACAGTTCACACTAAAAATGGAGGACTGCTTGATGATGTTGATCTGATCCGAGATGATGAAGTACTTTATGTGTCTTCAGAGGTTCCTGTTGTGGTACCACACCCTCTCGATATCAGACCACCTAATGGTGTGAGCGATAGTATCAGCGGAATGAAATcattcactgattgggtgacactAAATGTAGGAGGCAAAATGTTTACAACAACAAGATCAACATTGATGAATGAGCCTAACAGTATGTTGTCAAGAATGTTTTGCCCAGCAGACTCATGGAGTAACATAACAGATACAACTGGTGCAGTGCTTATAGACAGAAGTCCAGTCTATTTTGAACCAATCCTCAATTACTTGCGGCATGGACAGCTTATACTGGACAAGGACGTTAATCCACAAGGTGTCCTGGAAGAAGCCAAGTTTTTTGGGATCTCGGGCATCTTGGAGCAGTTAGAAGACATGGTGAAGAATATGGACAAGTCAGAAGATGCCCCTCTATCCCGAAACGAATTTGTTAAAATTTTACTATCGACCCCGTCAAACTGTGAACTCCGTTGCCAGGGTATCAATTTAGACTCGGCAGATCTTTCCAAGTTAGATCTACGTTTTatcaatttcaaaatggcgaatcTTAGAAAGACGGACCTTGCGCATGCCAACCTGTCAAACTGCTGCCTGGAACGAGCGAATCTATCTGGAGCACATATGGATGGTGCTATTCTGAGCTGTACACGTCTACAGAGggcccatatggaagggacctCCCTCCGAAGTTGCAATTTTGAAGATCCTGCCGGAACTAGAGCTAATCTAGAGGgtgtgaatttaaaaaattctgacttgGAAGGAAGTCAGCTTGGGAACGTAAACCTTCGTGTTGCTACCCTGAAAGGTGCTAATCTTCAAAACTGTATTTTACGGGGGGCTGTGCTAGCCGGTGCAGATTTGGAGAATTGTAATTTAACCGGCTGTGATCTCCAGGATGCTAATCTCCGAGGCGCAAACATCACTGGTGCAACGATTGCAGAAATTACAGGACCCCTCCACATGACAGCTTTTGTTAGAAACCAGCTACCAGGCTCCGCGTTATCTGTTTCCTCGACCCCAGACTCTTAAACGAGAAGTCAGTTAACGGCCATGATAAAGGCGACGACCTGTAAACTAATTCAGTTCAAACTTAACGCGGCTACCAAACAAGAAGTTAAAAATGACGCTCGGTTTGCAGTATGGAGAAAACTGCCAAAAGGGTAGACTTTCGTAGTCAATCGATCGTGCGGAGAAACAAAAGCAGCTTACAGTGAGGAATGACTCCTTTGAGCAATGGATCGTCCTCAGTGACAAGTTCGCAACCAGGCCAGTGAAGTCTGTGGATTCCTTGTATTGATCAAAATTTCAATTCTTCAAACTGGTTGCCATACAGTTCCTTTAATGTTAGTACTAAGAATTTAGTGGCACATCAAGACGGTATGTGTACTAATCTACGGCTCTGGCTGCAGACAAAGGCCGTAATTTTGCTTTTGCCAATCTCGCAGCAAAATACGAGAGTTTCTAAGTATTTTGTGAGTAACACAGCTGAAACTCAGTGCCAATTAATCTTGTTGTTTATTTCATCGAACGTTTTAAAGGGCCCTTATCACACTTCTGCGCATGTCCGGCAATTTGATTTCTGATCCTAAGGAACACTCTTCAAAGTTGAATTCTGTGAAGAaagaattctgtaaatcctttTCCATCGACCTTGTGAGACCCATGGAAGTTCAAATAACGGTATTGAAGAATTACTTGCTCATTTGTGGAGAATTTAAACGGCATATTGTGTTTTTATGTGAACATCGtcgagaaattatatttgatgtccTCGAGGGGAGATACATGAAGCGGCTCGGAACGAAAGCTGATTTCGCCTTCAGTCGCTGtcttgtttctaaaaaaagaagaaaacaaacgaAGA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q7L273	BTB/POZ domain-containing protein KCTD9 OS=Homo sapiens OX=9606 GN=KCTD9 PE=1 SV=1
Q80UN1	BTB/POZ domain-containing protein KCTD9 OS=Mus musculus OX=10090 GN=Kctd9 PE=2 SV=1
A5PKG7	BTB/POZ domain-containing protein KCTD5 OS=Bos taurus OX=9913 GN=KCTD5 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001748 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00805 all species →	Pentapeptide	Pentapeptide repeats (8 copies)	Repeat	Interproscan
PF11834 all species →	KHA	KHA, dimerisation domain of potassium ion channel	Family	Interproscan
PF13599 all species →	Pentapeptide_4	Pentapeptide repeats (9 copies)	Repeat	Interproscan
PF02214 all species →	BTB_2	BTB/POZ domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011333 all species →	Homologous_superfamily	SKP1/BTB/POZ domain superfamily	Interproscan
IPR001646 all species →	Repeat	Pentapeptide repeat	Interproscan
IPR051082 all species →	Family	Pentapeptide repeat and BTB/POZ domain-containing protein	Interproscan
IPR021789 all species →	Domain	KHA domain	Interproscan
IPR000210 all species →	Domain	BTB/POZ domain	Interproscan
IPR003131 all species →	Domain	Potassium channel tetramerisation-type BTB domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14136 all species →	UNCHARACTERIZED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0051260 all species →	Biological Process	protein homooligomerization	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSVBPP00000028282.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.