Detailed information of ENSVBPP00000029595.1 in Meandrina meandrites

Genomic Location: chr3:21536992...21544218
NR annotation: XP_020623858.1, deleted in malignant brain tumors 1 protein-like [Orbicella faveolata]
Species Meandrina meandrites · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P45845Protein-lysine 6-oxidase OS=Sus scrofa OX=9823 GN=LOX PE=1 SV=2
P16636Protein-lysine 6-oxidase OS=Rattus norvegicus OX=10116 GN=Lox PE=1 SV=2
P33072Protein-lysine 6-oxidase OS=Bos taurus OX=9913 GN=LOX PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000074 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00040
all species →		fn2Fibronectin type II domainDomainInterproscan
PF01186
all species →		Lysyl_oxidaseLysyl oxidase FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001695
all species →		FamilyLysyl oxidaseInterproscan
IPR000562
all species →		DomainFibronectin type II domainInterproscan
IPR050912
all species →		FamilyLysyl oxidase-like proteinInterproscan
IPR013806
all species →		Homologous_superfamilyKringle-like foldInterproscan
IPR036943
all species →		Homologous_superfamilyFibronectin type II domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45817
all species →		LYSYL OXIDASE-LIKE-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005507
all species →		Molecular Functioncopper ion bindingInterproscan
GO:0016641
all species →		Molecular Functionoxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptorInterproscan
GO:0004720
all species →		Molecular Functionprotein-lysine 6-oxidase activityInterproscan
GO:0005615
all species →		Cellular Componentextracellular spaceInterproscan
GO:0018057
all species →		Biological Processpeptidyl-lysine oxidationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ENSVBPP00000029595.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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