Gene detail

Detailed information of ENSVBPP00000031512.1 in Meandrina meandrites

Genomic Location: not available for this species
NR annotation: CAH3103349.1, unnamed protein product [Pocillopora meandrina]
Species Meandrina meandrites · all data for this species · gene families

Sequence

CDS

Transcript

ENSVBPT00000032830

AAGCAGCAAAGATGTGAATGACTTACTGAACGTGTCGAGTGAAATGTCGTTAAAAATCAAGGCAAATCTTCTTAAAGTGGAAGCGGCTGGGCAGTACATCAATGAGAACAGGACGGAAGAGGGCACAACCAACCTTCTTGCTGCGATGAAATGTACCACGGTCGTTGAGACGATCGATGGATCGGTGAAACCAAGAGAAGATGTAACCAGTGGCGAATTTCTTGAGAGAGTCGGTACCCACTATGTGAGTGCAGTTACATGTGGCATAGAGATGGTGGCAAGCCTCAAATTCAAGTCTTCATCAATTTCAGAAAATGAGCACATCAGAGGTAGCGCCGAAGGACAACTAAATCTTGGAGTTGTTGATGCAGGACTTAAAGCTTCGTTAAATAAACTATCATCAGAATGCAAGGATCTGTCAGGTATCTCTATTAAATGTTACGCCACAGACTTACCAGATAAACTTCTCACGAGCCTGGAAGGACTGGTGTCACTGATTGAGGAATTTCCTTCTAGACTGAAAAGCATTAATGATGGTAAAGGAATTCCTATGCAGtttgaACTTCAGCCGGTAAAGAACATCATCCCAACAGCAAACGCCTATCTCCAGAATCAGGCGTTTACGTATCAATTAGAGGAACTGGAAAGCCGATTTGATGACCTGCGCAATGCTCAGACTCTGGCGAACGCATACCTGCAGAGCGTGAAAGGAACTCACGATGATATTAATGGGTTTATCACTAAGATAGACAACATCTCTCGCGTGTTTCGTTCAGTAATTTCTAGTTTGAACAAACATGAGGGGCAGGAGCAGATGGACACTTGTATGCAAGCGTACGAGGAAGCTTTTGACGGACTTGATATCGAGGGAAAATTTGTCCGACAATGGAAGAAAATATTGAGCTCAAAGCTTCCTCAGGGAAATCCTCTTACAGTTGTTCTTCTTGGAAAAACTGGAAGTGGAAAAAGCGCCACTGCCAACTCCATTATTGGAAGAGAATGCTTTGTAGACAGTCCAAGTGGTGGCTCCGTAACACAGTATTGCAGAATTGAGAAGAGAACGGAAGAAAGAGTTATCGGTGTAATAGACACCCCAGGTATTATGGATACAGCCCCAGTTAGCGCCATGGATAAACTCAAAGGAAAAGCAGATGAGGTCACTCTAATCTTCAATCAAAAACAAGACGAAGTTCTCACGGAACTATACAATACTTTTGTTATGTCCCCCGACGGCATTGATGCCGTTATTCTAACCATAAAATACGGTTGCAGATTTGGCATGGAGGATGCTGAAGCTTTAAAAAGACTTCAAAACTTTTTTGGAAAAGAAGCGAACGATCATATGGTCGTAATCTTTACACATGGTGACCAGGCTGTACGTGAcgcaaagaagaagaagaggagcaTCGAGGACCATCTGAAATGGTACATTGGGACCTTGCCAGATTGGGTTCAAGCGTTTTTGAAGGAAATAGGAGACCGAAGACTTCTGTTCAACAATGCTTTAGATGTCGATGAAAACCCAAATGATTGTAAGAAGCAGGTGTCTGAGCTAATTCAGCTTATTGACGAGATGAGGAAGGAAAAGGGATCATTCATAGACAGACTGTGCAAAGCGTCCAAAAGTGAGCTAGATGAAGAGATTAAGGAAGAGTTTGAACTATGTAAACAGGTTCGAGGTCTACATAACAACAGAATGTACGAAGCCTTTCTATTAATCAACGCATCGAAGATAAATGCGAGAAAATAGAGGTGGAGAACACTCAACGTAACAAAGAGGAAGAAATCAAGCAACATTCGgtggcaaaagaaaaaagagagaGTATggatgaacgaacgaacgaacgaacgaacgaacgaacgaacgaacgaacgaacgaacgaaaacggattttcaaataaaaatctgCTCGTTCACTTGATGTAGATGCCTATTCTACAACACATTTACCAGTCAATTAATTTTTGCCTGTCAATTTTGTATCACCAGAAACCGATCaaaataatgaagaaaataaacaacttcgcaaaaagttaattttcatttaaaacagaaaaagtgACCACCCAAAAGGTTGTAATAATGCATTTTATCTGATTAGTTTTTTTTGGTCTGAATAAAAtcgttttgattttgaaaa

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P54120	Immune-associated nucleotide-binding protein 8 OS=Arabidopsis thaliana OX=3702 GN=IAN8 PE=2 SV=1
Q9C8V0	Immune-associated nucleotide-binding protein 6 OS=Arabidopsis thaliana OX=3702 GN=IAN6 PE=2 SV=1
Q9T0F4	Immune-associated nucleotide-binding protein 13 OS=Arabidopsis thaliana OX=3702 GN=IAN13 PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001280 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04548 all species →	AIG1	AIG1 family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR006703 all species →	Domain	AIG1-type guanine nucleotide-binding (G) domain	Interproscan
IPR045058 all species →	Family	GTPase GIMA/IAN/Toc	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10903 all species →	GTPASE, IMAP FAMILY MEMBER-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005525 all species →	Molecular Function	GTP binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K03650	mnmE, trmE, MSS1; tRNA modification GTPase	EC:3.6.-.-	Transfer RNA biogenesis	ko03016	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.