Gene detail

Detailed information of ENSVBPP00000040151.1 in Meandrina meandrites

Genomic Location: :...
NR annotation: XP_020609641.1, mothers against decapentaplegic homolog 3-like [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSVBPT00000041885

GACATTTTATGATGCCATGCCACAAACAGGTGAAAGAGGTCATGTGACATTGGTCAAGGTTGTACACATGAAATCATATTTCCATTTTGTTGCACAGTTGTAAAATGTCTGCCCTGCACCCAGGCAAAGTTCTCTGTTCAACAACtggaaaagaaaattttcaacGTGTTGCACGACTGTTAATAAGTGGAGGCACCACGCTACTGAGAGAGATTTTTGATCTGATTTGTCCACCAAGTAATCTTCCCACCATACTCAAAAATCCAGCCACAAAGAAACAACTCAAAGCAGCAAAGCTCACCAAGCCACAGTGGGACTGTCTTTACCCTTCCCCAGGGGTGTATGGCAAGTCAGAGGATTTTGATGTAACATTGCTCTTCAGGTTGCTAAAGACAATATCCAACCTGATCCCTCCTGCCATGGGCTGGGATGCATTACCAACAAGTACAGACCACAGTTTAGCTGCAGATTTAGCGAAAATTAAATATTACCGCAACTCAGTGTATGGTCATGTGAATCAACACATGGAAATAACTGATGATGAGTTCCCACAACTTTGGCAAGAAATCAGAGAAGCCCTTGTGGGAATTGCAGGACAAATCAGTTCTGCAAAGAAGACTGAATGGCAGGAGTCCATTAATGACTTTTTACAGGATCCCCTCACAGCAGAGGATGAAAGAAATGTAGAGGAATTGCTGGAGTGGTATAGAAATGATATAGAAGTAAAGAAATCTGTAGAGGAACTGAAAAGCACAACTCAAGAAGTCCAGGAAAGGATAACCCGTCTGGAGACATCTTTTAACGGTGTCTGTGTAGCAACACAAGACATCAAAGAGATAAAAGATATGCTGCTTCAATTGGTAAGCTTCCCTGCTGAAGGCTGTCAGTCAACTGAAGATGCACAACCTGTGCAATACACAGAACCATCTTACTGGTGCCAAATTTCATACTATGAGATGAACAAAAGAGTTGGTGCAAGTTATCATGCAGCTAGACCAAATCTCACAGTTGATGGGTTTACAGATCCATCTAGTTCAGAAAGATTCTGTCTTGGATTTCTGTCAAACATTGACCGAAACCCTCAGATTGAGATGGTACGGAAACACATTGGAAAGGGACTGCGTCTCTGTTACATTGGTGGGGAAGTGTTTGCCGAGTGTTTAAGTGACAGAAGTATATTTGTACAGAGCCCCAACTGTAATCAAAGGTATGGCAGGCATCCTGAAACTGTTTGCAAAATTCCGCCCGGTTACAACTTAAAGATCTTTAACAACCAAGAATTTGCCCAGCTGTTATCGCAGTCTGTCAATCAAGGTTTTGAGGCTGTACATGCACTGACTCATATGTGCACAATCAGAATGTCATTTGTCAAAGGCTGGGGTGCTGAATACAGCAGACAAACTGTGACAAGTACACCATGCTGGATTGAGCTTCACCTTAATGACCCTCTTCAGTTGCTTGATAAAGTTCTTACACAGATAGGATCTCCTTTAGATCAGTGCTCATCATGGTCATGATATATGCTAAAACTGACAtgataaattattattgttcaACTGCCCACAACAAGGTTGGGAGTGCAGGGGGGGAGGGCAAGATTATTGTTGTGATTCCATAGTTTGGTGAATTGAATATTTTGGAGTACTGGTATATATTGGACTCAACGAAACATGTATTCTatttgtgaaagatgaaatattcagcatgttgtgagcgtgggacaaagaaagtcCCCAAGGGGAttccatgacctcccaaacaccgggcgggtgCTCTATctactgagctacgagaactaatggtgagcaaggccattttactaggttcataggtgaaatttatttgtttcataATTCGTtgcaaaataaagttttgtgtCTTTATGGCAAGACCCTCCATtgcccccctcccacccccctcCACAGGcacacacacatacacacaaataccgtaatgattcgatttagcaccctccttccaataagcgccccttctgaataagcgcccaccttcgaatgtgtttttgtcaataagcacccctattccaataagcgcccccattcttacagttttgttattgttagttaccgtagataaactcatgaacattcaccgtaccgtacatgtatatatttattgcaaaaataaacagttcttttgaaagtaactgaactttcaacaatttgttactgttacagtgtCTGTTTTTGttagtaattttaatatttattaaaaatttgttttgaacatttggttgtttctcaaaaaattaaataagcgccctgtcccgaataagcgccctgtctcgaataagcgccctcccttgaggtgccaaaagtaaataagcgccccgggcactaaattgaatcattacggtaccCACAGATACCAAGATCTAGACTCAAAACATATAAAGGGGAGTATTCTAATGTTTGCAAGACCATATATTTTAGCATACAGGACATATAAATATCAGGAAAATTGGAAGAAAATTGACCAAAAAATTGAAACTATTT

Protein

Uniprot

Uniprot term	Description
P84022	Mothers against decapentaplegic homolog 3 OS=Homo sapiens OX=9606 GN=SMAD3 PE=1 SV=1
Q8BUN5	Mothers against decapentaplegic homolog 3 OS=Mus musculus OX=10090 GN=Smad3 PE=1 SV=2
P84024	Mothers against decapentaplegic homolog 3 OS=Sus scrofa OX=9823 GN=SMAD3 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF18738	HEPN_DZIP3	DZIP3/ hRUL138-like HEPN	Domain	Interproscan
PF03166	MH2	MH2 domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR041249	Domain	DZIP3-like HEPN domain	Interproscan
IPR013790	Family	Dwarfin	Interproscan
IPR017855	Homologous_superfamily	SMAD-like domain superfamily	Interproscan
IPR001132	Domain	SMAD domain, Dwarfin-type	Interproscan
IPR008984	Homologous_superfamily	SMAD/FHA domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13703	SMAD	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0007179	Biological Process	transforming growth factor beta receptor signaling pathway	Interproscan
GO:0009653	Biological Process	anatomical structure morphogenesis	Interproscan
GO:0030154	Biological Process	cell differentiation	Interproscan
GO:0032924	Biological Process	activin receptor signaling pathway	Interproscan
GO:0045944	Biological Process	positive regulation of transcription by RNA polymerase II	Interproscan
GO:0060395	Biological Process	SMAD protein signal transduction	Interproscan
GO:0070411	Molecular Function	I-SMAD binding	Interproscan
GO:0071144	Cellular Component	heteromeric SMAD protein complex	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan