Gene detail

Detailed information of ENSVBPP00000041233.1 in Meandrina meandrites

Genomic Location: not available for this species
NR annotation: CAH3188956.1, unnamed protein product [Porites evermanni]
Species Meandrina meandrites · all data for this species · gene families

Sequence

CDS

Transcript

ENSVBPT00000043091

TAACCAGACCTCAACCACCGCCTGGCGTTACATTCTTACTATTTCGTACACTGATCAGCGTGCTGGAGCAGATTTCAATTTAAAGCGTCATGGCTCGCTTTTTTTGCTTTGCGTTGCTGTATTTCTCCTTCGGAGGGTCTCAAGCGTCCGAGAACGACTTCAAATATGGCAAATTTCCAGATGGGTTCCTGTGGGGCGCTGCCACGGCAGCGTATCAGGTAGAAGGAGCTTGGAATACAGATGGAAAAGGGCCCAGCATCTATGATTTTATGACCCATGCCGTACCAGAACAATTTCACAACAAGACGGGAGATGTAGCGTGCGACAGTTACCACAAGTACAAGGAAGACGTGAAAATTTTGAAGAACTACGGAGCCAAAGCTTATCGGTTTTCGATCGCATGGAGTCGTGTACTTCCTAACGGAACAACAGATCACGTTAACCAAGCTGGCATTGACTACTACAACAATTTAATCGACGAGCTCAAGGCGAATGATATTGAGCCACTTGTGACGTTGTATCATTGGGATCTGCCCGAAGTGTTCCGCGCGATCGGCGGCTGGACCAATCGAAGTATGATCGACTACTTCAACGACTACGCCCGATTTTGTTACGACACGTTCGGGGGCAAAGTCAAGTACTGGATCACGCTAAATGAGCCCGCGATCGTCATGTTACGTCATCCGTTCTACATGTTTGGGTACATCGCGAATAAAACCAAGTTATCGACCCTCCGCTATCGAACGGCCCACAACCAAATACTGGGCCACGCCAAGGCTTATCAGACCTATAAGAAGAGCTTCCAAGCGCAGCAAGGCGGGAAAATAACGCTTGCTCTGAGCTCTGGCTGGGCTGTGCCAAAAAGCGACTCTGCCAAAGATAAGGCCGCCGCTGACCGGTACATGCAGTTCCATCTTGGCATCTTCGCGCATCCCATATTTGTGAACGGCGATTACCCGGATGTTGTTAAAAAAGTAGTGGGAAACCGCAGCGAGGCTGCTGGGATTGCCAGTCGCCTTCCAAGCTTCACAGAGGAGGAGAAAAACATGATAAAGGGAAGCTATGATCTGTTTGGCCTAAATCATTACTCCACTGATAAAGTGGCTGACAAATCCGTGGGCAATGAGCAATCGTTTGATGCTGACGAGGCGTTCACTAAGAGCGGTGACCCTGCCTGGCCGAAATGGGTTAACGGTAATGTGGCTCCTTTTGGATTCCGCAAATTGCTGAAATACATCAAGGACAATTACAATGATCCAACAATTATCGTGACCGAGAATGGAGTGTCACCACCCGGAGAAGCAAGTAAAACTGGCCAAAACCGGTTGGACGACGTTTTCAGAGTGGATTATCATAAGAGGTACACAAACGAGATGTTAAAAGCGATCATCGACGATGGCGTGAAAGTGAAAGGTTACATGGCATGGACATTAATGGATAACTTTGAATGGGGAGCTGCCTACACCACCCCGTACGGGCTCCATTTTGTCGACTTTGATCACGACCCTGACCTCACACGTGTTCCCAAGAAGTCGGTCGGTTTCTTCAAGCAGCTGATAGCTGACAATGGGTTTCCTGATCCAGATGCGCAATCTACAAGTTCAAATATGCTGGCTAACGGtgctttgatttacgcttttacCATCATTTTATTAGTTTAAACTTGTTAACTGCGTTTGTGAACATAACCTGCTgttttttaattctgtttttcACTGGTACCGGTATCCCAAACTCACTGCGTGAACattgctttatttttatttttagcaaaaaaacCCCTATGTGCGCGCGGGACCAAAATCGATCCATTTTGGTTTGAAATTGCCGGGGATATAGATTTCGACCATTATGGTCTGAAATGGTCGTCGCTTGTGCACTCTGAACAGCCATTAGGTTCAATtcttagttgtttttttttttttatcaatgtcATTTAACTCTTGCGATGTGCGATTTAAATAACACCGGGGATTTAAAGCCCCTCTCAATGCCCGATTCCCCACTATGagacgcgcc

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P09848	Lactase/phlorizin hydrolase OS=Homo sapiens OX=9606 GN=LCT PE=1 SV=3
W5PLZ6	Lactase/phlorizin hydrolase OS=Ovis aries OX=9940 GN=LCT PE=1 SV=1
P09849	Lactase/phlorizin hydrolase OS=Oryctolagus cuniculus OX=9986 GN=LCT PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001722 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00232 all species →	Glyco_hydro_1	Glycosyl hydrolase family 1	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR018120 all species →	Active_site	Glycoside hydrolase family 1, active site	Interproscan
IPR001360 all species →	Family	Glycoside hydrolase family 1	Interproscan
IPR017853 all species →	Homologous_superfamily	Glycoside hydrolase superfamily	Interproscan
IPR033132 all species →	Conserved_site	Glycosyl hydrolases family 1, N-terminal conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10353 all species →	GLYCOSYL HYDROLASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004553 all species →	Molecular Function	hydrolase activity, hydrolyzing O-glycosyl compounds	Interproscan
GO:0005975 all species →	Biological Process	carbohydrate metabolic process	Interproscan
GO:0008422 all species →	Molecular Function	beta-glucosidase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01188	E3.2.1.21; beta-glucosidase	EC:3.2.1.21	Biosynthesis of various plant secondary metabolites	ko00999	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.