Gene detail

Detailed information of ENSVBPP00000042256.1 in Meandrina meandrites

Genomic Location: :...
NR annotation: PFX16146.1, putative RNA-directed DNA polymerase from transposon X-element [Stylophora pistillata]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSVBPT00000044162

ATGGAGATACCTGAATTTCAAGAACCGGTAGGCCCTGTAAATATCCTTCCTGCAGAATCTTCAGCAAAAGACTTCTTTTCTTTGTTAGTGGATGACAGGATGCTAAATAACATTATTcgtgaaacaaacaaatatgccAAACAGAAGCTGGAAGATTCTGGGAAAGACTCATCACTTTGGGTCCCTGTAAATTTAATTGAACTCAAAGCTTTCTTGGGTCTTTTTATTGCAATGGGTTTCCATGCACTGCCTTCAGTGAAAGACTACTGGAGTGAGGAATGGATTCTTGAAAGAGATTTCTTGACCTCCTTTATAATATTCATGTCAATGATAACTCCAAAATGCCAGCTGCTGGGACTTGAAACTAACTTCAAACTGCAATACAACCCTCACCGTGAACAGGCAGTTGATGAGGCAATGGTCAAGTACAAAGGGAGGACATCATTGAAACAATATATGCCAATGAAACCAATCAAAAGGGGTATCAAACTGTGGTGTTGGGCAGACAGCACCAATGGTTACTTGTGTGACTTTGATGTCTACACTGGTAAACAGCCCAGAGGAGTTCAACATGGTTTAGGGTACACTGTTGTTTCAAACCTTTGCCAGCACATAAGGGGTAAATGGTACTCTgtattttttgacaatttttttactTCGTGTAAACTAATTGAAGATCTTTACAGTCACAAGATTATTTGTTGTGGAACTGTCAGACAAGGTCGAAAGGAATTCCCTCCTGCCCAGTTTGACAAGGATGCCATAAAAAATTTACCTCGTGGTAATATAATGTGGAGAATGAAAGGCCCCATTCTGCATGTCCCGTGGATGGACAAGAAACCTGTTTGGGTTGCTGGAACTGTAACACCTGCTCCTCCAGCTAGTCTCCCTGAGTCTGAGAATGAGAGCGACGCTATTCAGCAGTCAGCAGCTACTTCTGCACCTTCCTCGCATCCTGCTACCACTGAGGTTTTGTATCCTCAAAGATGGCCTCACAATTTTGGCCTCACAGTTTCTTTGTATCAAACGAGCACAaataatattattctttattcatttcctcaaatattgtggtctccctgtggtcTCCAGAGAACTCGAAACCCAGCAAATTTGACACTTGTCACTACGACCCTCGCAGGCCCGACGAAAGGATCGACTACGGCCTACGTTCCATCCTTTTTGGTCTCAAATGTGATGTCTTTGGCTCCAAAAATTGATGAATTACGCCATGTTCTGCAAAATGCAAATTTGGATTGTGTTTGCATTACCGAGTCCTGGCTTCGAAGTCATATCCACGACAATGTGGTTGCTCTTAAAGGATTTAATATCATTCGCAGGGACAGAGTCGAATCCGAGCACGGCGGTGTGTGCGTGTATGTCAAGGATACGATTAAGTTTACAATTCTGGATGATTTACACAATCCATCTTTCGAAATGCTTTGGATCAAACTTAGACCAACACGTCTCCCAAGGGGATGTACTTCCATTGTAGTAGGAACGCTTTATCACCCACCAAGTGCAAGTGACCTTGCGATAATGGAGTACTTAACCAAGTGCCTATCAATTATTGAATCACGCTTTGCAAACTGCGGTTTTCTGGTTCTTGGGGATTTCAACAGATTAGACATTACACCCCTCCGGAACAATTTTCAACTAAAGCAAATAGTCCACTTCCCTACCCGCGGCAGAAGAACACTTGATTTAATCCTCACCAATATTTCAGAATACTACCATGCTCCCATTGAACGCCCCCCTCTCGGCCTATCTGACCATGCTACAATTGAACTCCAGCCAAAGGAAAGAGCTCATATGAAGCAAACTACGATCATTATCAAAGCGAGGGATTTGCGCCCTAGTAAACGCCATGCAATGAGCTCCTATTTGGAGGCGGTGGATGTGTGCGCCATGACCAGCGCCTTGGAGACGTGCGTGGAAAAAGTCTCGCTCTTAGAAGAGATTATGACAACAGGTCTCGATCGCATCCTCCCCATCCAATCCCGGAGGGTGCATTCTACTGAGCCTCCTTGGATTACCTCCACTCTCAAAGAACTGATTCAAGCGCGCCAACGCGCCCTTTCCCGTGGGGACAACCAGCATTTTCGCGAACTTAGGAATCGTGTGAATCGTGAGAGGAAAGCGTGTCGGGCTAAATACTTCCAAGCGAAGGTTGAGCACTTAAAGGAGTGTAAGCCGTCTGCCTGGTGGTCTGAAGTTAAGAAGCTTAGCGGCTGTTCTCTGGCGTTTACTGAAAGATCCTATGTCACTACATCGCTTCAACACTTATATGGGCCTGCCGATAACGTCAACCTTGCCAACATCGTCAACAGGGCCTTTCTCTCGCCCATGCGTAGTTTCACACCTATCCCGGCTGACTACGTCATAGATCCTGCCAACAGCGCAACCCAGCACCTAGGTCTTGTTGTATCAAAGGAATCAGTTTTTAAGAAATTGATAAAACTAAACAGAACTAAAGCGCATGGTCCTGACGGAATCCCAGGGTGGGTGTTGAAAGAAAATGCAGACCTTTTGGCAGGGCCAATTGCAGACATTCTTAATTCATCTTATCGTGAAGGTCGCCTCCCTCCATCGTGGAAAGAGGCAGATGTTGTCCCAGTGCCCAAGCAAAAACCTGTGCAGGATATAAACAAACATCTTCGACCCATCTCCCTGACACCAATTCTATCAAAGATAGCGGAGGAGTACGTCGTCGAATCTTACGTCAAGCCTGCTGTCCTCCAAAAGATCGATCCACAACAGTTTGGAACAATACCCAAATCCAGCACTACGCATGCGTTAATAAGTATGATGCACTACTGGGCGAAATCAACAGATGGTAATGGATCGACTATGAGGGTTATGCTCTTTGACTTTCGCAAAGCATTCGATCTGATCGACCATCATGTTCTTGCGCGAAAGCTTTCCTCGTATGACATCCCAAGACCACTTATGTGTTGGATTATAGACTTTCTTATGGATCGAAAACAAAGGGTGAAGCTCAGCTGCGATTGTGTCTCGGAGTGGGAGGCTGTTCCTGCGGGGGTCCCACAGGGGACCAAACTGGGCCCATGGCTATTTCTTATAATGATAAATGATCTCTCTGTAGCTGACACAACTCTCTGGAAATATGTTGATGATACCACTCTCGCCGAGTCAGTATCCAAGAACGAAACCAGTTGCATGCAGTCATGCGTTGATGAACTAGTTCGGCAGTCTGAAGCTGATGGTTTTCAGCTAAACGAGTCTAAGTGTAAAGAGCTGAGAATATCCTTTTCTAGTTCACCTAGTACTGTAGGCCCTATCACTATTAACGATAAGCAAATCGAAGTTGTTCCGTCCGCAAAGCTATTAGGAGTTTTAGTTTCAGACGACCTCAAGTGGAATGTACATGTTAATCATATTTGCAAAAAGACCGCAACACGACTGTATTTCCTAAAGCAGCTAAAACGCGCAAAGGTCAATCCGAAGGATATGTTACTGTTCTACACAACATGCATTCATCCCGTCTTAGAGTATGCGTGCCCAGTTTTTCATAATGCGTTGCCGCAGTACCTATCTAATAACTTGGAAAGACTGCAAAAGCGCGCATTGCGGATAATATATCCTGACCTATCTTATGCTGAAGCTCTAGTAGCTGCAGGCATCACTTCACTGTATGAGAGAAGACAGGTGCTGAGCGAAACTTTATTCGATCAAATTATGGAAGACCCAAGCCATAAgctacatgatctactgccgccACGTAACGAGTCCACTTACTGCACACGATCCCGGGGATACTTTAAGCTACCGATCTGTAAGACACATAGGTTTAGGAAAACTTTCATTATGAACCAtaATGCAACATCCTGA

Transcript

ENSVBPT00000044162

Protein

Uniprot

Uniprot term	Description
Q96DM1	PiggyBac transposable element-derived protein 4 OS=Homo sapiens OX=9606 GN=PGBD4 PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03372	Exo_endo_phos	Endonuclease/Exonuclease/phosphatase family	Domain	Interproscan
PF13843	DDE_Tnp_1_7	Transposase IS4	Domain	Interproscan
PF09004	ALKBH8_N	Alkylated DNA repair protein alkB homolog 8, N-terminal	Domain	Interproscan
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR005135	Domain	Endonuclease/exonuclease/phosphatase	Interproscan
IPR029526	Domain	PiggyBac transposable element-derived protein	Interproscan
IPR036691	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR015095	Domain	Alkylated DNA repair protein AlkB, homologue 8, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46599	PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0008168	Molecular Function	methyltransferase activity	Interproscan
GO:0016706	Molecular Function	2-oxoglutarate-dependent dioxygenase activity	Interproscan