Gene detail

Detailed information of ENSVTRP00000002593.1 in Madracis senaria

Genomic Location: :...
NR annotation: CAH3031921.1, unnamed protein product, partial [Pocillopora meandrina]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSVTRT00000002865

TTTCGTCCACACGAGTCCGGTGATCGTTCATGGATCGCTATCACTCATAGGGATAGTAACagatacaaatttaatttttctccaaCAGAACTTGCAATTCGCCAAAGTAAAGGATTTATCAGCAAAGATTCGCTGGTATTGGCTCTGGAAGACCCTAAGGGTGGCGTTGGAAGCGGCGGAGCTACGCTGAATACTTTATTAATTGTCACAGAACATCTAAGTGCTAAAGCCGGATTTCGGGTTACCAATGAAAGTGTTTTAGAGAATGCAAACATACTTCTAATGCATATGGGTCGCGATTTTCCATTGAGTCCTTGCGGAAGATTCTTCAACACTCTACCCACTAAACATTCGGACGAATCCAAAGAGAATCTGTGCGATGCTTTGGTGTCTAACTTCGACTATGTGCTCCATGTTATGTCAGAAATGATATCAGTGAACGCTCCTCCTGGAGTGTGGATATGCAGTGCAGATATGCTACCATCTGGCAAAGTAAAAGACATAATATTTCGAGAAGTAGAAGATGAAATAAGAAAATGTGCTCTCAACAACGGCAAAGTACCAGTGGTAAGTTGGAAttttctatctatctatcatgTGCACCATCCTCTGGATGCCTGTACCTATTGTGGTCTGGATAATGGAGCCGAGCCTATCAAGTTATCGATGATATTTGACATCCTTCTCTGCCTGGCTGAAGATGTCACAGAGTCAGACTTTGTTAGTGGCAAAAGAAGCGGTTCGTATGGATTCAACACTCGTTATGGAACAAACGGAGATTCACAGCGGGAGGCGATGCTGATGAGGTGCGCGAGAGCATTGCTGTGGAAAAGTCTCAGAGGATTGCAGCTGAAAGGAGTTATTCTTGATAACGGAACGTTTGATTACATGAAGCCTTCTGGAGAATGCTACAGGAGACAAATGCTCAATAGCATTAACTTGCTTAACTTTAGTGGAGTGCCATTTGATTGCAACAGACGCACCCATGTGCCGTTATGTAAGGTAGGTGTGAGGTGTCTACTTATTGGTTTCTACTTATTGAGTCTTCCTAGTGATCTGTGTGCCATGCACTGGCATGTATCTCTCCCAAGACTAGGTGTTAAGCCACAGAGAGTACTGGTTGCATTTGGAGTTTATGATGATTTACAGGTGCCGTATGTGTCTCCTAACAGTACTTACTGTAACAAACCTTGGAAGACGTTTTTCGACAGAACAGGAATTAGCTCTGAGGCTCTGTTAGCTCTGTTACCAGAACAAGACAGATGTCTTTGGAACGCTAAACTCTTTCCTGTCGTACATTTTGATACAAAGCAAAGGGATACAGGGCCCAATATCGCGTGGCTTATCATACCAATTCTGTTAGCCATGGCACGTTCCATTGTCAACTTACGTTTGACTGAAATAAACTTTCCTTTCAGGTGGCGTTCTTCTTTGAGATTATCGTTGCAAGAAATCTTGTCCCTGATCGATTTGTCAGCAGAGTTTGAATGGAGAAACAAATTGTGGTTTGAGATCGGAAAATCGCAAGTCGAGAACACGTTAAGGAACTGTACGAATGATTGTCTCCTACCTTTCTTTAAGGGTTGCGTAAAAGAGGGATTCGCGAAAGCCGTCTTGGAAGTTTTAGATCAAGTTGCATCCAGTTCCGCCTCTCCAAGTGTGGCTGCACGGACCCTGGCCTGTATTGCTGACGTGTTAGGTGCGATGGCAGGAGAGAGAGCTAGGCTGAGAAGTGGGCCGGCCCGCAATAAATCCTGGATGTACGCATTTGAACTACTTGATAAAGGTGATATACCAGCGGGTGTGAAAGCTCTCGCAGAGGAGCGATCGCGATGGCTTGACAGACCTGATCTACTTATCCGAGCGGCTCGTCATTACGAAGGAGCGGAGCAGATTCTAAGAAGAAAGGCGGTTCTCACAGCCAAAGAGAAAGTAACCGGAGCAAGAGTTAGGAAAATTCACGTATTTAAAGTAGTTCTCGTGATTCACTCGGGTGTGCACAGTGTTAGAGTTGTGTGCAGTGAATTATCAGACTTGGCAAACTACACCCAGCTACATGCGCCAGGTGCCCTTCTTAAAGCCTGCTTTTGCTTTCTGGACATTGCAACTCTTCCTTCAAGCGAAACATTATCCGAACAGCTGAACAGAAAATACCAGGCAGGCTTTGAGCTCCATACCTGGTCGACCGCTCCTCAAGGAAGTGGCCTGGGCGTCAGTAGTATTTTGGCGGGAGTTATCCTGGCGGCGCTTTTACGCGCGACAGGCCGCACAGCCAGCATGGATTCACTGATTCAGGCCGTGTTGATCGTTGAACAGATGTTAACTACAGGCGGCGGCTGGCAGGACAACGTCGGGGGACTGTTGCCTGGTTTCAAAATGACTCGATCCAAGGCCTCGCTACCGTTGAAAGTAGAGGTGGAGACATTGAATCTTCCGCAAGCCACCATCGATGGCGTGGCGCAACGTTTGCATTGCGTCTACTCGGGGAAACCTCGTCTTGCTAAGAATTTATTACAGGTACATCAGAATTGGTACGCGAGATTTCCAAAGATCACTGCTAATGCCGATAACTTGATTAAAAACGCAGAGGAGGCTACTGAAGCGTTAAAGGAAGGAAATATTGAAAAGCTCGGTGCGTGCATAAACTGCTATCGAAAACAGAAGTGTATCATGGCCTCTGGAACTGAACCTCAAGGGATAGGCGAAATGATGAAAGCACTTGAACCCTTAGTACTAGGACAAACCCTCACCGGAGCTGGCGGAGGAGGCTTTTTTGTGCTCCTTACTAAAGAGCCCAACATGGCGGACAAAGTTAGAGCGATGATACAGGAAAACCCGCCTTCGGACGAGCTGGCTTTTTTTGACGTGAGCATAGACTGGGAAGGGCTAACTGTGAGAGTAGAGGAACCCTCGCAATAA

Transcript

ENSVTRT00000002865

Protein

Uniprot

Uniprot term	Description
Q8N0W3	L-fucose kinase OS=Homo sapiens OX=9606 GN=FCSK PE=1 SV=2
Q7TMC8	L-fucose kinase OS=Mus musculus OX=10090 GN=Fcsk PE=1 SV=1
Q9LNJ9	Bifunctional fucokinase/GDP-fucose pyrophosphorylase OS=Arabidopsis thaliana OX=3702 GN=FKGP PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00288	GHMP_kinases_N	GHMP kinases N terminal domain	Family	Interproscan
PF08544	GHMP_kinases_C	GHMP kinases C terminal	Family	Interproscan
PF07959	Fucokinase	L-fucokinase	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006204	Domain	GHMP kinase N-terminal domain	Interproscan
IPR036554	Homologous_superfamily	GHMP kinase, C-terminal domain superfamily	Interproscan
IPR052203	Family	GHMP Kinase-Related Enzymes	Interproscan
IPR013750	Domain	GHMP kinase, C-terminal domain	Interproscan
IPR020568	Homologous_superfamily	Ribosomal protein uS5 domain 2-type superfamily	Interproscan
IPR012887	Domain	L-fucokinase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR32463	L-FUCOSE KINASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0042352	Biological Process	GDP-L-fucose salvage	Interproscan
GO:0050201	Molecular Function	fucokinase activity	Interproscan
GO:0016772	Molecular Function	transferase activity, transferring phosphorus-containing groups	Interproscan