Genomic Location: :...
NR annotation: CAH3031983.1, unnamed protein product [Pocillopora meandrina]
| CDS | |||||
| ENSVTRT00000003777 | |||||
| Transcript |
| ENSVTRT00000003777 |
| Protein |
| ENSVTRP00000003498.1 |
| Uniprot term | Description |
|---|---|
| Q2U2J6 | Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=prp5 PE=3 SV=1 |
| Q5BDW4 | Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=prp5 PE=3 SV=1 |
| A1CQA9 | Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=prp5 PE=3 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00514 | Arm | Armadillo/beta-catenin-like repeat | Repeat | Interproscan |
| PF00270 | DEAD | DEAD/DEAH box helicase | Domain | Interproscan |
| PF00567 | TUDOR | Tudor domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR035437 | Homologous_superfamily | SNase-like, OB-fold superfamily | Interproscan |
| IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR016024 | Homologous_superfamily | Armadillo-type fold | Interproscan |
| IPR000225 | Repeat | Armadillo | Interproscan |
| IPR011989 | Homologous_superfamily | Armadillo-like helical | Interproscan |
| IPR002999 | Domain | Tudor domain | Interproscan |
| IPR014001 | Domain | Helicase superfamily 1/2, ATP-binding domain | Interproscan |
| IPR011545 | Domain | DEAD/DEAH box helicase domain | Interproscan |
| IPR008978 | Homologous_superfamily | HSP20-like chaperone | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR22655 | UNCHARACTERIZED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0042078 | Biological Process | germ-line stem cell division | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0005524 | Molecular Function | ATP binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K18409 | TDRD12; ATP-dependent RNA helicase TDRD12 | EC:5.6.2.5 | Chromosome and associated proteins | ko03036 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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