Detailed information of ENSVTRP00000004913.1 in Madracis senaria

Genomic Location: :...
NR annotation: PFX32250.1, Tubulin beta chain [Stylophora pistillata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P11833Tubulin beta chain OS=Paracentrotus lividus OX=7656 PE=2 SV=1
Q3MHM5Tubulin beta-4B chain OS=Bos taurus OX=9913 GN=TUBB4B PE=1 SV=1
P68371Tubulin beta-4B chain OS=Homo sapiens OX=9606 GN=TUBB4B PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 activity RING|RING
Ubiquitin FamilyE3|E3 activity RING|U-box
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00091TubulinTubulin/FtsZ family, GTPase domainDomainInterproscan
PF13445zf-RING_UBOXRING-type zinc-fingerDomainInterproscan
PF03953Tubulin_CTubulin C-terminal domainDomainInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001680RepeatWD40 repeatInterproscan
IPR001293DomainZinc finger, TRAF-typeInterproscan
IPR036525Homologous_superfamilyTubulin/FtsZ, GTPase domain superfamilyInterproscan
IPR003008DomainTubulin/FtsZ, GTPase domainInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR008280Homologous_superfamilyTubulin/FtsZ, C-terminalInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR027370DomainZinc finger, RING-type, eukaryoticInterproscan
IPR020472RepeatG-protein beta WD-40 repeatInterproscan
IPR017975Conserved_siteTubulin, conserved siteInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR000217FamilyTubulinInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR018316DomainTubulin/FtsZ, 2-layer sandwich domainInterproscan
IPR003613DomainU-box domainInterproscan
IPR037103Homologous_superfamilyTubulin/FtsZ-like, C-terminal domainInterproscan
IPR023123Homologous_superfamilyTubulin, C-terminalInterproscan
IPR002453FamilyBeta tubulinInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11588TUBULINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0005874Cellular ComponentmicrotubuleInterproscan
GO:0007017Biological Processmicrotubule-based processInterproscan
GO:0000226Biological Processmicrotubule cytoskeleton organizationInterproscan
GO:0000278Biological Processmitotic cell cycleInterproscan
GO:0005200Molecular Functionstructural constituent of cytoskeletonInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0003924Molecular FunctionGTPase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K07375TUBB; tubulin beta-Exosomeko04147deepkoala

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