Genomic Location: :...
NR annotation: PFX29025.1, putative helicase with zinc finger domain [Stylophora pistillata]
| CDS | ||||
| ENSVTRT00000005804 | ||||
| Transcript |
| ENSVTRT00000005804 |
| Protein |
| ENSVTRP00000005525.1 |
| Uniprot term | Description |
|---|---|
| Q9BYK8 | 3'-5' exoribonuclease HELZ2 OS=Homo sapiens OX=9606 GN=HELZ2 PE=1 SV=7 |
| E9QAM5 | 3'-5' exoribonuclease HELZ2 OS=Mus musculus OX=10090 GN=Helz2 PE=1 SV=1 |
| Q6NYU2 | Probable helicase with zinc finger domain OS=Danio rerio OX=7955 GN=helz PE=2 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF09412 | XendoU | Endoribonuclease XendoU | Family | Interproscan |
| PF13086 | AAA_11 | AAA domain | Domain | Interproscan |
| PF13087 | AAA_12 | AAA domain | Domain | Interproscan |
| PF00773 | RNB | RNB domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR019734 | Repeat | Tetratricopeptide repeat | Interproscan |
| IPR036855 | Homologous_superfamily | Zinc finger, CCCH-type superfamily | Interproscan |
| IPR047187 | Domain | Upf1-like, C-terminal helicase domain | Interproscan |
| IPR001900 | Domain | Ribonuclease II/R | Interproscan |
| IPR012340 | Homologous_superfamily | Nucleic acid-binding, OB-fold | Interproscan |
| IPR018998 | Domain | EndoU ribonuclease, C-terminal | Interproscan |
| IPR037227 | Homologous_superfamily | Endoribonuclease EndoU-like | Interproscan |
| IPR011990 | Homologous_superfamily | Tetratricopeptide-like helical domain superfamily | Interproscan |
| IPR000571 | Domain | Zinc finger, CCCH-type | Interproscan |
| IPR041677 | Domain | DNA2/NAM7 helicase, helicase domain | Interproscan |
| IPR041679 | Domain | DNA2/NAM7 helicase-like, C-terminal | Interproscan |
| IPR045055 | Family | DNA2/NAM7-like helicase | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10887 | DNA2/NAM7 HELICASE FAMILY | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0046872 | Molecular Function | metal ion binding | Interproscan |
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0004540 | Molecular Function | RNA nuclease activity | Interproscan |
| GO:0004521 | Molecular Function | RNA endonuclease activity | Interproscan |
| GO:0004386 | Molecular Function | helicase activity | Interproscan |
| GO:0000184 | Biological Process | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | Interproscan |
| GO:0003724 | Molecular Function | RNA helicase activity | Interproscan |
| GO:0005737 | Cellular Component | cytoplasm | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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