Gene detail

Detailed information of ENSVTRP00000006440.1 in Madracis senaria

Genomic Location: :...
NR annotation: RMX37128.1, hypothetical protein pdam_00015760 [Pocillopora damicornis]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSVTRT00000006782

ATGACTCTGTCTGTGAGTAGTCTTCTCCTGGAAAGCTTCAGTACCGACTTCGATCCTCTTCAACCGTCGCTTTTCAAGGATTTTGGCGACGATTCAGAAGATTTGAAAACCAAGAGCAAAGAAGCAACCGATGACTTATGGAAGAATTTTTCATTTCCGCCGACGCCACCGATCTCGCCGGCTTGTTCGCCCCCGTACGCCGCTACAGAAGAGGCAAGAGAACAGCCAGTTTGCTACGGTATAGCGGACGAGGGACTCTCTTTGGACGAAGAATGTTCGCTGTACTTCCAAGCCAGCGATCTGAAGGATATATTGATCAAAGATTGTATGTGGAATGGTGCGGCGTTCGATAAAAACCCGGACAGGAAACAGCAGCGATCGCATTCAAAACCGGAGCGCGTTCGTCTGCTGTGTCAGACACCGCCACTGAGCGAATCTGCGGCGAGGATTTTGAGCGTGGATCCGTCAGAAATCTTTCCTTTTCCTCTAAGTGCAAGCCCGGGTACTGAGCTGCGTGAAAACATCGAGGAGCAATCGGATTCCGAAGAAGAGGAAGTCGAAGTTGATGTGGTTACTATAGAAAACTCAAGCAAACGAGAGCAGGAGCCCGACGAGGTTATTGAAACCGAAAGTGCGGAAAGTTGTACAACAATCGACGAAACGGCCACAAGTGAAAGCTGTTCGGAGATATCGAGTATAGAACAACGAATGGAAGAAGACCCCGACCGCGATGAAGACGAGAAAACTGAATATGTGGGCAAGATAAGAACACGTCGGCATAGGAAAGTGTTATCCAGCGACGGATTAAATTACCGGGAAGGCAGAAAACTTGTTAAGAATGTCAGCAGTTCTGGAGAAAGTGACGAGTCGGAAAACGATAGTGAATTCACGCGCGCGACGCATAACGTACTGGAGCGAAAGAGAAGGAACGATTTGAAAATGAAGTTTCAAAAATTACGGGACTGTGTACCGGAATTGAAGGACAACGATCGCGCACCGAAAGTCTCAATTTTGCGGAAGTCTTGGGAGTATATAAGTCACATCAAACAGGAAGAAATCAAACTCCTGGCAGAgctggaaaaacaaaagaaaattaacgCTGTACTGTGTTGTGAGATGTTTTTTGACGAGAGATTACGCGGTCCTCAGCCCATGGACTCATCCACGCATCAGGATCTCATCGTCGCAGAAGATCTGTATAACCCAACGATTCCAAACGACGACTTCTGGAAGAAATTCGCGCTCCCAACGCCGCCTTATTCTCCAGAAAACTACTTACCCCAGACTAAACGCAACTTTGTCATTCCACCGAGGAGGAATGGCCTTCAAGTCGTGCCCGAACCGGAAGATCTGTCTTCGGACTTGCCCTTGGTTCTATCCGACGCAGAGATGGAACGTCTAACCTGTAGCACAATAGATGATGAGTATATCTGGCCGGCCGGCGAGACCGACTTTGACAGAGTTGAATCGCAGAGGTTTCAAGGGAATCGAGTGGTTCTCTCAGCGGCATGCGTCAACGAACCCAGCGCTGAAATGGCGACTGATCATCAAATGATGAGAGATTTGTCTCCTTTTGTCGCTACGGTTCCCAACCAAGACCCCGCGCTTGGTCCACAACAAGTTGATAGATGGCACTCACAGTTCTCAGTGGAAAATCCTGCGGCGCTGAGACTAACTCAACCCCCAAGCGAGGAATTTGTTCCTCATAGGTTCGATTGTGCAGTGTCGAAGAAAACACGCAAATCTAGAAGATCAAGTCGTCAAGATTCACCGCCAATGGAGGGGGATGACTCTGAAGACAATGAAACAAGCCGAGCAACTCATAACGTCTTAGAACGACAGAGAAGGGAGGATCTAAAATGTCGATTCCAGTTCCTTAGAGACAGTATACCAGAGCTCGAAGATAACGATCGAGCGTCGAAAGTCTTAATCCTTAAAAAAGCGCGGGAATACGTCCATCAGTTATTCCTAGAGGAGGAACGCTTACTTGCAGATAAGGAGTTAGAGCGCCAAAGGAGGCTTATACTCCTTGAGCGCCTCGCTTGTTTACGGCAAGGTTATGgtgtaatgtaa

Transcript

ENSVTRT00000006782

Protein

Uniprot

Uniprot term	Description
P01108	Myc proto-oncogene protein OS=Mus musculus OX=10090 GN=Myc PE=1 SV=2
Q9MZT6	Myc proto-oncogene protein OS=Sylvilagus floridanus OX=9988 GN=MYC PE=3 SV=1
Q9MZT8	Myc proto-oncogene protein OS=Pteropus hypomelanus OX=9405 GN=MYC PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01056	Myc_N	Myc amino-terminal region	Family	Interproscan
PF00010	HLH	Helix-loop-helix DNA-binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050433	Family	Myc family transcription factors	Interproscan
IPR036638	Homologous_superfamily	Helix-loop-helix DNA-binding domain superfamily	Interproscan
IPR011598	Domain	Myc-type, basic helix-loop-helix (bHLH) domain	Interproscan
IPR002418	Family	Transcription regulator Myc	Interproscan
IPR012682	Domain	Transcription regulator Myc, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45851	MYC PROTO-ONCOGENE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0046983	Molecular Function	protein dimerization activity	Interproscan
GO:0003700	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K09112	SMYC, MYCS; myc-like oncogene	-	Transcription factors	ko03000	deepkoala