Gene detail

Detailed information of ENSVTRP00000007323.1 in Madracis senaria

Genomic Location: :...
NR annotation: RMX47933.1, hypothetical protein pdam_00005379 [Pocillopora damicornis]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSVTRT00000007782

atggaaaatagaAGCCCTCCGGATCCTATTTATGTTCTGCGCGGAACAGAAGCAGGCATAAATGTCGTCAAATTTGCACCAAAGTCTGTGAGAGAAGAAGGGCTTTTACTTTCTGGGTCTGTTAAAGGAACTATTAGTTTGTGGAATCTTAAGACAAAAAGAACAGAGGTAACTTTGGATGGTCATAATGGACATGGGATCCTTGCTGCAAATTTTCACCCCTGTGGGAATGTAATCAGCCATGGCAGGGATGGGTATTTAAGAACATGGCAGTGTTCTGAAGGAAGAACTGAAGTTGTCAACAGTATACCAGCtccttttcttggattttgccagttttgtattttgtcaAGAGaattattattaaaattaatgttattggCTATTGACTTGTTCCatgtttttatttcagttcTCTGTATAGATGTAGacaaagaaaatcttaaaatagTCTCTGGCTCAGTGGACAGCAAGTTGTGTGTGTCATCGGTATCACCCCAGTACACCTTATCAGTGGAAAAACAAATTCAGCTTAAGAACCCTGGCATTGCTTCAGTCAAGGTCAGGAAAGATTGTAAAATACTGGCTACTGGTGGATGGGATGGCAGATTAAGAATATACAGCTGGAGAACGCTCAAACCGTTGGCTTATCTCAGTTATCATGAGCAAACTATAAACGCGGTGGATTTTTCAGAGGACTTGTGTAGTCATGGACAGCTGTTGGCTGCTGGTGGAAAAGATGGTGAGCACTTGCTGAACCACACCGCAATGGCCGTTCGGCGAAAAATTAAACGAAACCTTGCCCTGCTTTTAATGCTCACTTTTGTTTCTGTGGGTTTGTTTTTTGCTCTTCTTAAAACATCATCGCGAGACATTGTCAAGAGAAGAAACGTATTTGGATCTTTGCAGCTGACATCGTCAAATCTAACGACAGCGAAAGCTCCTTTGGGGAGGGACAGAGCTTCATACGTTGAATCAACGGAGAAGTTATTGCAGCCTGAGATGAGAAAGCGTCAAATCTTGTTAATTGTTGCGCATGGTAGATCTGGTTCTACATTTCTTGCGGACATTTTCAACAAACATCCACGAGTGTTTTATGTCTTCGAACCATTGCACGGGATTCAAGTTGGAAAAATACACGTCAAGGATTATGATGAATTTGCGATTAATTTTCTTCATCACATTTTTCAATGTAACTTCAGTATAGGAAACACAACTCAGGAGATTGGTTGGTTTTTTCGTTTCTATAGCCGAGCGTTAAGCTCGCCACCGTTTTGTAAATACAAACAAGCAGATCCAAGATGGAGGCAGAAGTATTGTTTGGCTGTAAAGGAACAAGATcttgaacatgcatgcaaagtGCAGCATGACACAGTTGTTTATAAGCTGCTTTTGGATAGAATTCCCGGTCAATCCATTGAGAAGCTTTTTAACGCGTGTGAAATGGCAGAAGTTGAATGCAAAGTTATTTACTTAATACGTGATTTAAGACCAGTTGTAATGTCTTCTGAGAAAGTACGGTTTTTCAAGGAGGTTAACTGGAAGACAAGACCAGCGATGAGACGGTTCGTTTATTCTTGTTGTGAAATGATTGAAATGAATCTTCAACTGGTGAAAAATTTTCAACCATCTCTTCGCAATCGTGTTAGACTGGTGCGATATGAAGACTTAGCAGTTGAACCATTAGAAGTTTTAGACTCTTTGTACAAATTCGCAGGACTTGAAATgatagaaaatatcaaacaatGGATTGTGAACATAACCCAACCGAGCTTCGAGGTTTTAAAGGCAGAAGAGCGACACTCCGTCTCTATGGTAAGAAACTCGTTGGAAGTTCTGAACAAGTGGCGACGTTTAACGTATTCCTGTGACGTGAACGTGATTGAGCGATATTGCCGTGATGTGATGAAATTAATGGGCTACATTGTTACAGAGGGATCAGTAGAAATGCTTCGAAATCTTGAGACTCCACTCTTTACTGGCAATTACCCTGCACAAAACTGGACAACGGGGTAG

Transcript

ENSVTRT00000007782

Protein

Uniprot

Gene family

Uniprot term	Description
Q9BYB4	Guanine nucleotide-binding protein subunit beta-like protein 1 OS=Homo sapiens OX=9606 GN=GNB1L PE=1 SV=2
Q9GZX3	Carbohydrate sulfotransferase 6 OS=Homo sapiens OX=9606 GN=CHST6 PE=1 SV=1
Q9GZS9	Carbohydrate sulfotransferase 5 OS=Homo sapiens OX=9606 GN=CHST5 PE=1 SV=3

Gene family	Subfamily
Ubiquitin Family	UBD\|Other\|Beta-prp
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|CDC20
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|DWD

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00400	WD40	WD domain, G-beta repeat	Repeat	Interproscan
PF00685	Sulfotransfer_1	Sulfotransferase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001680	Repeat	WD40 repeat	Interproscan
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR000863	Domain	Sulfotransferase domain	Interproscan
IPR036322	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR051135	Family	Gal/GlcNAc/GalNAc Sulfotransferase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10704	CARBOHYDRATE SULFOTRANSFERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0008146	Molecular Function	sulfotransferase activity	Interproscan
GO:0001517	Molecular Function	N-acetylglucosamine 6-O-sulfotransferase activity	Interproscan
GO:0006044	Biological Process	N-acetylglucosamine metabolic process	Interproscan
GO:0006790	Biological Process	sulfur compound metabolic process	Interproscan