Gene detail

Detailed information of ENSVTRP00000010340.1 in Madracis senaria

Genomic Location: :...
NR annotation: CAH3111364.1, unnamed protein product [Pocillopora meandrina]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSVTRT00000010926

TAAAGATGGCGGATTTCATGGAAGATGTTGGAGTTGGTTATTATCGATCTTTAGATCCTCCAAAGAACTTCGTTATTAAGTTGAAACTGCGGAGAGTAACGGCAGCAAGTTATCTTCCAGAGTTTAAAATTGGTTCACAGCAGAACGTCAATGTTCAAGAAGGAACCGAAGTTGCTGGTGAAGCTTTGGAAATGCCAGAGTTAAGACGAGACCAAGGGAAACAGCCGGACCAAGATTCAGAGGAATGTGTGTTTTATTGGCAACAAAAAATGTTCTCTCAGAGAGAGATGGAACTGTATGGAGATATATCTAACTGCTTTGGACCACTGGAGCAGAAGTATCATGCAGAAATATTAAAGTTAAGGAAAAAGGGTGGAAGACCAAATAAAAGACTGTTCTCTTATGTCGACTGTGATAGTTATGTTAATCTGGATGAGGAGTCAAGAACACTGACAACTTGTCCCACTGAAGTACCAAGCTTCTTGGCTAAGAACATGACAACTGTCAGGAGAAGAAATATTGGAACTAAAGTTGACAGAAGaaATCGACCTGGTGGATTTGCTCCTAGAGCTGATCCTGTCATTTTCCATGAGACTGAAACCAGCAAGACAACTGCACATGTTGTTAACATACCTTACAAGACCATGCACGTAATGGGTGATCTTTCTCCAGAGGGAAAaacTGAAAGTGACCAGGATGATGAATATGTCCTGTTTTCCGTCAAGATTGATGCTAATGgacaaatttttgttaaacctGATTTCAATGGGGAAAAGCCAGCATATCGTATTGAGACACACAATGATCTGAGAGAGGTTTATGAATATACTATTGAGCACTGTTCTACTCCAATGACAAgTGACCAGAGAGAACAAGAATTTAAGAGTTTCAACGAGCTGTACAACAGACATGCTTTGTATTTGGCTTCACAAGTTGGATCAGGATTTGAGCCTATGCCAGAACCTGGAGTTTTGAGAATGAATATTTTGGGCGAAATAGTGTCTGCTAAAGGGTTTGACTATGATGGTCTGTATGTGCACTTTTGTCTGGACCTGCCGCAGAAATGGAGACCAATTGACGACCCATTGTTATCCGGAGTCACGCAGACCTGCATGACAAAGCTGGAAGGAGAAGATTATGTTGCACATTTCAGTTTCCCTTTTGACTTCTCATTAATTTATGAAGAGGATGATGATTCTGatGATTTTATTCACTGGCCGACGCTGTTCATTGAGGTGTTATCACTGGACGGCTGGGAAAGATTCAGAACTGAGGGTTATGCATACATCACCATACCCAGTAAAGCTGGCAGTTACAGCATTGAAGTGAACACTTGGCGACCCATAGGAAATGGCACAGGTCCTGAGATGCGAAGGTTCTTTATTGGTGGATCACCAGAACTGGAAGATCCTACATATCCTCAAAAACCTGTTATGGCTGATGATAAGGTATTGAGCAAATATTTCTTCAGGACAGCTGCTTCTGGAAGTGTGACTGTAAAGTTTCATATTATGCAGCAGTGCCAGTCTTTTATGGAttcaaaagcaaagaaaacgcGCCGTACAAGAACCATACTGGACAGACTTGGAGGAATGAATGCTCTGGACTCTCTAGCACAAGTCTTGGatGCATTCCAAAGAGCCAAAAAACGGATGTTAGATGCACGTGAAGGGCTTCCATCTGTAAAATAAAGCAAATTTCGTTGTTcatatttataaattaaataagtacgagaaaaaaaaagcaacataACTTCTGGAGGCTAACGGCAACTGAAAACTTCATAACAACCACAAAGTGGTAGATACTGATGATGCTTTAACGTCATTCTGCTGAGTGTTTAGAATAAAACCTGCTACAAGAAACAGCCTAAATTACAGCAGAGAAGTGGAGGAGAATAATCAGAGATTATGAGGTCCTCTGGCATGAGGCAAATTAGCTTTAACTAGCCCCACTATTAGTCAACTATTAGATTAGTCAGTGACGCAAAGCCAAATAATGTCAAAAACACCACCTGTCATCACTTTAAAGGATTCATGTGTTAAAAAAGAGTTTGTATTTGGTTACTTAAGCTGGATATGAGGATGACAGTGAGATTGAATCTGGTAAATGATTTACAGTTGTCTGTCCAGAACTACTGAGTTATTAAATGTACACTTCATTAGATGCTTTGCTAGGAATTACTGTAGCAACACAATATTGCGTAAAGTAACTAAGAAActgaatttaaaaatattattaatggaGGGGCACTCAAAAAGAATTTGATCACAACCAAAAAGCCACAAAATTCTATGAAAAGTGAAAAATAGCAGACATCTTATAAATATTGTAAAAATgtacaaatatatatttaacaaaGCTATTTTATTCACAAATAATTGCTGTAAATACAAGACGTATgtgatttatttttatgtaCAAACTTGACTTACACATACTTAGTTGTGGAATTTAAACATTTGTATATATCTGCTAaccattctttaaaataaaggcCTTATTTTACTACAACGAACAAGAACAATCCAAATTTCTAACTTAAGGGTAAAGTGTTACATAATGTATTCATCTTCTTGACTCTGTTTtacttataatttaaaaatgaataaatccAATGGTTCACATGACAGTTTGACTATGAATTAAGTAAGATAATTATCAGATGTTTCAGATACAGCTTCCAGCCA

Protein

Uniprot

Uniprot term	Description
Q9NXB0	Tectonic-like complex member MKS1 OS=Homo sapiens OX=9606 GN=MKS1 PE=1 SV=2
Q5SW45	Tectonic-like complex member MKS1 OS=Mus musculus OX=10090 GN=Mks1 PE=1 SV=1
Q499Q5	Tectonic-like complex member MKS1 OS=Rattus norvegicus OX=10116 GN=Mks1 PE=2 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07162	B9-C2	Ciliary basal body-associated, B9 protein	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR010796	Family	B9-type C2 domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12968	B9 DOMAIN-CONTAINING	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0036038	Cellular Component	MKS complex	Interproscan
GO:0060271	Biological Process	cilium assembly	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K19332	MKS1; Meckel syndrome type 1 protein	-	Cilium and associated proteins	ko03037	deepkoala