Gene detail

Detailed information of ENSVTRP00000016383.1 in Madracis senaria

Genomic Location: :...
NR annotation: XP_022792726.1, leucine-rich repeat-containing protein 27-like isoform X2 [Stylophora pistillata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSVTRT00000017294

GCAGAACAAGATGGCGGTTGGAGATGGAGGAGTCGACGAAGCCGTAGAACAGCTGATCAATACCGCTTGTGCCTTAGGAAGTACGACTATTGACCTTAGCaagaaaagattaacacaagtTCCAGCTGATGTACTTAATCTTCAGCAATTAGAGtttttgtatttagAGGGAAATTCCATTAGCTCATTGCCAGAAGAGTTGTTCGATTGCCTCCCAAACTTGCGATGGCTTGATTTGAGGAACAACCGCATAACAGAGATTCCTCCCATCATTGGAAAACACAGAAATTTGAGAAATTTACTACTAGAAGGAAACACTTTAGAAACACTTCCTTTAGAGCTAGGCTTGGTAAAGAGTTTATCAGGACTCAATCTTTCTAACAACCCACTTGAGTTCCCTCCTTCATTTATTGTGGAAAAAGGCACACAGGAAGTTCTCAAGTTTCTTAGAGATCAGTACTTGCTACGACTGCAAGAAAGAGGAGCGGTCCTGGTTGAAGAGCACCCAGAATCTTCATCAAGTGAGGAGTTACTCTTAGCTCCACCACAAGATAGTGAAATCACATCTAAAAAGGATGCCTCATCAACCCGCCGtagaaaaagtaaaacagatTCGAAGCAACTTCCCGGACCCATAAACACACCAGTGACATTCCACCCCCCTCCCTCACGGTCAGACGTGTTACGGCGGGAATATGACAAGCAACGGATGGAGCTGCAGTCAAGCGGCGGACTGTCAGCGGATATACGAACCAGAGAATTGACGGGATCTGGTAAAACTGCGCCCAGGCAAAAGAAAACCAGCCCCAAGTCAGAAAGCTCTAGGTCAGCTCGGTTCCAGTACGACGCCGGCAACGCGACTCCAAGATTCCCGGATTACGAAGCTCGGTTGGCGGAGCAACAAGAAATGGCGATTTTAGCTGTGATGAATGAAAAAGAAGCTTTGATATTACAGAAAAGAAAAGATAAACAGGCTCTGGATGACTGGCGGGAACAGACCAAACTTCTTCgtcaacaaaaacagaggcttgcggccgTAAAGGGCTCGACCCCAGTCGATATAAAAGCACCTTATGGAACCGAAAAGTCGGCCAAGGAAGAGGAAAAGTCTCCTCATGGCTACGCCAAGAAGCTCAAAGAACTTTTAGAAGAAAAGGATGGCAAAGGAGCGGCAAGAAGGGCCCTAGGAGACCGCGAGTTGGAGACAAGAATCAAGGTGCACATGGAAAAGTTAAAAGAACACCGAAATAAGACATACGGATCGATACAAGAAGAGCTCGAATCTGCGAGAAAGAACTTAGAAATGGCTCGTGAATATCAGCGTGAGGTTAACGACAGGAGAGAGTTGGAATATCGCCTGAGGGCCTTTACTGGGGACGACGTGACATCATCACACTGGAGCTCAAAAGCGAAGACGAAAAATGTTCCTAAATGAACATGATCTGCTCAAACAGTGTTATGTACATAGGACTGTAAAAAAGTTTATACAGAGTGCAACTGAATTAGAGTGTTGAgattaatatataatatattgaACGTTTTCTGTAAGAAGGGCGTTGGTCACGAGAAGAAACAATTTCAGAattacttgatattttaatttatatatttgaaaattatagttttttttagtttattgaCTTGTGCTGTTATTCACCGTGGAAAGATGGAAGGCAGGCTAACAATACTTACTTACTTTGGCTTACTTCGCCCTTCGTCGAAGTAAGCCAAATATGAATATAAACATATGAATATATGGGCTTACTTTGTCCGAGTACTCCCGGAGTACTAGGAGCAGTGCCCGAGAACAATCTGCGACTGAAGCGCGAAAAAAGTGCTACTGTATTAAAAACACCATCTACTGAGTTACCGATCAGTTTGCTCGGCGAGTAGAACTCAACTAATCGTACGATTAAAAACACTGATTGTAAAATCGCTCAATTTAGTTCTGTTCGCTCTCCGGTTCTTCCTCCTCGGCCACATTAATAACCGGAAACACGTGCTGCTCTTGTGCCACCAGACGGCCTCTCTGTTCCAGCTCCTGCTCGATCTGCTGTAATCTTCTGTACTTATTGACATGCTCAGCGCGGACTGGACCGCCGAGTTTAATGAACCGCGCACCAAAAGCCACAGCCTGA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13855	LRR_8	Leucine rich repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR032675	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR001611	Repeat	Leucine-rich repeat	Interproscan
IPR003591	Repeat	Leucine-rich repeat, typical subtype	Interproscan
IPR050216	Family	Leucine-rich repeat domain-containing protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48051	-	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K16532	CEP72; centrosomal protein CEP72	-	Chromosome and associated proteins	ko03036	deepkoala