Gene detail

Detailed information of ENSVTRP00000020516.1 in Madracis senaria

Genomic Location: :...
NR annotation: CAB4024874.1, hydroxyacid oxidase 1 [Paramuricea clavata]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSVTRT00000021752

ATGCTACGAAACGTTTCTCAACAAGATATCTCTGCTACGGTTCTGGGTCACAAGCTAAGCATGCCAATCTGTGTGTCACCTACTGCCTATCATGGAATGGCGCATCCAGATGGGGAACTGGCCACAGTCAGAGCGGTAAAGTCTGTAGACACAGCTATGGGCTTAAGCATATACTCCACAACAAGTCTCGAAGACGTAGCGCGGGAATGTCCGAACACCATCAAATTCATGCAGATGCAGTTTTACAGGGATCGACATTTTATGGAGCAAGTGGCAAAACGGGCTGAAAAAGCAGGCTACAAAGCAATTTTATTAACAGTTGATATTCCAGTTTATGGCAAACATATAGCGAGGCGGAAATTTTTTCTTCCGAAGCATTTGAAGTATGCTAATTTCTTACCTTTACAAAAGGAGAAAGGACTTCGAACAAACGAGGAATTTGATAACTATATCAGCGCTTCAAATGACAGGAATGTTGACTGGGAGGCATTTGATTGGCTTCGTTCGATTACGTCACTTCCGCTTGTTGTCAAAGGAATACTGACAGCAGAAGATGCTCGTCTCGCGGTGCAACATGGGGCTCGAGGAATTATGGTGTCAAATCATGGAGGGCGGCAACTAGATGGTGTCCCAGCCACTATTGAAGTGTTATCCGAGATAGTGGAAGCCGTGCGAGGAACTGGGGTCGAGGTGTATATGGACGGTGGCGTGAGACTGGGCACTGATGTTCTAAAGGCTCTTGCTTTGGGGGCTCGAGCGGTGTTTGTCGGCCGGCCAGTCCTCTGGGGACTTGCTTATAAGGGAGAGCAGGGTGTGACTCAAGTTCTTCAGATGCTCAGAGATGAGCTCCAAGTGGCCATGGGGTTTACGGTCCTTCTTAGCAGATCATTTCAATTTAGACCGAATATGGCTTATGGAGAGCCTGTTACAATGGATGATCTTGAGGCATATGCTGCCAGACATCTGGACAAAAGAGCTTACGATTACTATTCTACGGGAGCAGACGAAGATGTGACGTTACACGAAAATCGACAAGCTTTTAGAAGGATTAAATTACTACCGCGAATGCTACGAAACGTTTCTCAACAAGATATCTCTGCTACGGTTCTGGGTCACAAGCTAAGCATGCCAATCTGTGTGTCACCTACTGCCTATCATGGAATGGCGCATCCAGATGGGGAGCTGGCCACATCTGTAGACACAGCTATGGGCTTAAGCATATACTCCACAACAAGTCTCGAAGACGTAGCGCGGGAATGTCAGAACACCATCAAATTCATGCAGATGCAGTTTTACAGGGATCGACATTTTATGGAGCAAGTGGCAAAACGGGCTGAAAAAGCAGGCTACAAAGCAATTTTATTAACAGTTGATATTCCAGTTTATGGCAAACATATAGCGAGGcggaatttttttcttccgaagCATTTGAAGTATGCCAATTTCTTACCTTTACAAAAGGAGAAAGGACTTCGAACAAACGAGGAATTTGATAACTATATCAGCGCTTCAAATGACAGGAATGTTGACTGGGAGGCATTTGATTGGCTTCGTTCGATTACGTCACTTCCGCTTGTTGTCAAAGGAATACTGACAGCAGAAGATGCTCGTCTCGCGGTGCAACATGGGGCTCGAGGAATTATGGTGTCAAATCATGGAGGGCGGCAACTAGATGGTGTCCCAGCCACTATTGAAGTGTTACCCGAGATAGTGGAAGCCGTACGAGGAACTGGTGTCGAGGTGTATATGGACGGTGGCGTGAGACTGGGCACTGATGTTCTAAAGGCTCTTGCTTTGGGGGCTCGAGCGGTGTTTGTCGGCCGGCCAGTCCTCTGGGGACTTGCTTATAAGGGAGAGCAGGGTGTGACTCAAGTTCTTCAGATGCTCAGAGATGAGCTCCAAGTGGCCATGGGTCTGGCAGGTTTGAAAATAGatcttaagaggacctccgcgcaaaaatcaaacaaaaatgactttttttccgcaaggctcaaaaattga

Transcript

ENSVTRT00000021752

Protein

Uniprot

Uniprot term	Description
Q9WU19	2-Hydroxyacid oxidase 1 OS=Mus musculus OX=10090 GN=Hao1 PE=1 SV=1
Q9UJM8	2-Hydroxyacid oxidase 1 OS=Homo sapiens OX=9606 GN=HAO1 PE=1 SV=1
B0BNF9	2-Hydroxyacid oxidase 1 OS=Rattus norvegicus OX=10116 GN=Hao1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01070	FMN_dh	FMN-dependent dehydrogenase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR037396	Domain	FMN hydroxy acid dehydrogenase domain	Interproscan
IPR013785	Homologous_superfamily	Aldolase-type TIM barrel	Interproscan
IPR008259	Active_site	FMN-dependent alpha-hydroxy acid dehydrogenase, active site	Interproscan
IPR012133	Family	Alpha-hydroxy acid dehydrogenase, FMN-dependent	Interproscan
IPR000262	Domain	FMN-dependent dehydrogenase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10578	S -2-HYDROXY-ACID OXIDASE-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan
GO:0010181	Molecular Function	FMN binding	Interproscan