Detailed information of ENSVTRP00000023572.1 in Madracis senaria

Genomic Location: :...
NR annotation: PFX23346.1, Vacuolar protein sorting-associated protein 13C [Stylophora pistillata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8BX70Intermembrane lipid transfer protein VPS13C OS=Mus musculus OX=10090 GN=Vps13c PE=1 SV=2
Q709C8Intermembrane lipid transfer protein VPS13C OS=Homo sapiens OX=9606 GN=VPS13C PE=1 SV=1
Q96RL7Intermembrane lipid transfer protein VPS13A OS=Homo sapiens OX=9606 GN=VPS13A PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12624Chorein_NVPS13-like, N-terminalDomainInterproscan
PF06650VPS13_VABVacuolar-sorting associated protein 13, adaptor binding domainDomainInterproscan
PF16909VPS13_DH-likeVacuolar-sorting-associated 13 protein, DH-like domainFamilyInterproscan
PF09333ATG2-VPS13_CATG2/VPS13, C terminal domainDomainInterproscan
PF16910VPS13_mid_rptVPS13, central RBG modulesRepeatInterproscan
PF13499EF-hand_7EF-hand domain pairDomainInterproscan
PF16908VPS13_ext_choreinVacuolar sorting-associated protein 13, extended-choreinRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002048DomainEF-hand domainInterproscan
IPR026854DomainVacuolar protein sorting-associated protein 13-like, N-terminal domainInterproscan
IPR026847FamilyVacuolar protein sorting-associated protein 13Interproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan
IPR009543DomainVacuolar protein sorting-associated protein 13, VPS13 adaptor binding domainInterproscan
IPR018247Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR031645DomainVacuolar protein sorting-associated protein 13, DH-like domainInterproscan
IPR015412DomainAtg2/VPS13, C-terminalInterproscan
IPR002999DomainTudor domainInterproscan
IPR031642DomainVPS13, middle RBG modulesInterproscan
IPR031646DomainVacuolar protein sorting-associated protein 13, extended choreinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR16166VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0006623Biological Processprotein targeting to vacuoleInterproscan
GO:0019898Cellular Componentextrinsic component of membraneInterproscan
GO:0045053Biological Processprotein retention in Golgi apparatusInterproscan

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