Gene detail

Detailed information of ENSVTRP00000023685.1 in Madracis senaria

Genomic Location: :...
NR annotation: XP_027055613.1, ubiquitin-associated domain-containing protein 1-like [Pocillopora damicornis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSVTRT00000025121

GAAAGTCTTGTTTTGCAAAAACTTGGAGATGAAAAAACAACGGGAAAATGAGGGAATTTGAACTTCAGAATTTGAAATCACTTAGATCTGTCCCTCTCATTTGTATAAAAATCACGAGCTCATCCGGCAAAGAAAGCAATCTGACAGTTAGTTTACAAGATACAGTCAACGCAGTGAAGGATAAAGCACTCGGAGGGGAATATTCGAAGGAATCTCCCTTCTATAGACTTATCCTTGCTAAATCAAATCGTGAATTGATTGACCAGAAAACCCTAGAGGAAGAAAATGTTCAAGATGATGACGAATTAATTCTCTTCAAAAAACGCCACCATAGTAGTGGTGATATTGCTGAAAAAGAATGTAAAACTACTGCTTACCAAGTACCTGACCTCAAGGGGGTCAAGAAGCTCACTGCCAAGCTTGCGGCAGGGAAGACAAAAGAGCCATCACCCAGCCTGTCACCTCTTCTGTTAGATTTCAATTCAGAACTTAGAAGAATACTCATCTCCTTGATTGACTCTTCCATTCTTTTGCAATCTGTGAATACAGCTGATGAAACTGATAGTTCAGGTCAGGAAGAAGACATTCAGCCTAATGTTGATCCTTCTGTTCTCAAACAATTAATAGATATGGGCTTCAAAGAAACAAGAGCTCATAAGGCTTTGATTTTGAACAGAATGTCTCCAATGCTGGCAATGGAATGGCTTTTACAGCATGAAAATGATGCTGACATTGATGAGCCTCTGACGGTAGGAGCCAGAGCTGGTAGGACTCGcaggaaaagaaaggaatttcttCCCAATCCAAGAGCTGTGAACAActtgaaagaaatgggctttcagGAGGAAGAAATTCTCATGGCACTTAAAGCAACTGGAAACAATCAGGAAGCTGCTTGTGATTGGTTGCTGGGTGACAGACAGGGAGGAATAGGAGATATCAACGAAGGCCTAGACCAGTCTAGTCCGCTGTACCAGGCCATTATGGAGAATCCTTTAGTTCAGCTTAGTCTTAATAATGCCAGAGTTCTAGGAGCATTTGAAGACATGCTTGAAAATCCATCTACGAGTTCATTCTACATTAATGACCCAGAAACCGGGCCAGTGTTACTTCAAGTCTCTCGGATAGTGCAGGGATTTGCTAGATGATACTAAATCATGTTACTAAACCTGtaaatatttcatttatatGAGTAGGACTAGCATATTCTATTTCTGTGTCTTGTTGCTATTCTGAAATAGAGCATTCTTTTCACTGGTCATGCCAACATGGGTACAGAGATTGCGTGACTGCTTGAAAGAATCCCTACCATTGGGGTAGAGATGAAAATTTAATAGTGAAATGTGATTAATTAACAGAAGCTGTGATGATTGATGGCCAGTTGAGTTGCTGTATGACTTTGTTTCCTTGTTCTTTTTGCTTGTCATGCATATGCTCTCATCTGATGAGAATTAAAGGGGCTATGATAGGTCACGGTATTTTAAGTAATTCTCTTTAGTTTTGTTAACTATGGGCAGAGCAGTAGTCTTCTATTACCTAAATCAAGGACACATGACAACTAGGATGATTTCCAaccattataaatgacactttcatacaaattgagagaaacttgaaaaaagttgatCCAACATCTTTCAAGTTTACCCAAATGCAACTTGCTTTTATTAATCTTATCCGGTTATGCCCGCCCATGCTTCTTTTCAGCTTTACTGTGTTTCGTTTGAGTTCTCCTATTTAGTCGTTATTGCATTATTTTAGTTGACTTAGCCTGGTAGCAGGACTAGCAGGAGCTTGATTAAATGGGCACGAGTGAAATCGGTCACGTCAGGAAGGAGTCTTCTATCTTGTGCACGTATTACTCGTGTTCTCGCTGAgcgcctgctatgcaggctatagTTAACTCTATGACCAGCAGATGGTCAGTGGCGCaattgcctaaaattgcgtgacctagcccctttaaatcTTTTGTTGCTGTCAGGCATTTGAAAAAGGTTTATGTGAAAATACCATACTGGCTTATAATTTGCAG

Protein

Uniprot

Gene family

Uniprot term	Description
Q28DG7	Ubiquitin-associated domain-containing protein 1 OS=Xenopus tropicalis OX=8364 GN=ubac1 PE=2 SV=1
Q8VDI7	Ubiquitin-associated domain-containing protein 1 OS=Mus musculus OX=10090 GN=Ubac1 PE=1 SV=2
Q5XIR9	Ubiquitin-associated domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ubac1 PE=1 SV=1

Gene family	Subfamily
Ubiquitin Family	UBD\|Alpha-Helix\|UBA
Ubiquitin Family	ULD\|UFD/UBQ\|UBQ_PIM

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00627	UBA	UBA/TS-N domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009060	Homologous_superfamily	UBA-like superfamily	Interproscan
IPR015940	Domain	Ubiquitin-associated domain	Interproscan
IPR029071	Homologous_superfamily	Ubiquitin-like domain superfamily	Interproscan
IPR000626	Domain	Ubiquitin-like domain	Interproscan
IPR052476	Family	Ubiquitin-associated domain-containing protein 1	Interproscan
IPR041926	Domain	UBAC1, UBA domain 1	Interproscan
IPR041927	Domain	UBAC1, UBA domain 2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46738	UBIQUITIN-ASSOCIATED DOMAIN-CONTAINING PROTEIN 1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0000151	Cellular Component	ubiquitin ligase complex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K12174	KPC2, UBAC1; Kip1 ubiquitination-promoting complex protein 2	-	Ubiquitin system	ko04121	deepkoala