Gene detail

Detailed information of ENSVTRP00000024067.1 in Madracis senaria

Genomic Location: :...
NR annotation: CAH3167754.1, unnamed protein product, partial [Pocillopora meandrina]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSVTRT00000025503

GTAAAGAAACGATGACTCAAGTAGATGGGGGAATCCCCGGACGTTCCCAGGGCCCTCTCTGTTTGCCTTCATTAAAACTCACTCGGGATTCGATTGCACCATCACTTTCACCAGTGCGAGTTAGAGCAGTGTTTCAGTTAAAAATGGTTTTCAATCACCATAAATATCTACTTTCTATCAAGAAGAAACGTTACCTTGAACATCACCTAGAGGGAAAGCGCCCAGCTAGAATGGGTTTGTCAGTTTAATATGGCATGAAGGGCGCCGTCGAGTTAACGATAAAGCTTCTGCTGTTACTATGGATTCATTCTATGGTAGAATGTCGTTCCATAACATGTCCACTGGCATGGAACTTTGTAAAGTATGGTCCTAATGGTGAAATAGTGGACTGTAGACCATGCCCAGAGTGTGCTGAAGGGCATGGATTATCGATTCAGTGTGGTTCACAGATAGCAAATGATTCAAAAATAGAATGCGTGTCATGCGAGTTAAACAAGACCTACTCTGACAGCCATGGCATAGGCAGCTGCAGAACTTGTCAGTATTGTGGGTTAAGGAATGTAATCCAACAGTGTTCACCATCCCAAAATCGCAGATGTGGGAATAAATGTCCCAAAGGGTATTTTTTTGATGATAACATTAATGACTGCTTGGAAGTTAAGTCAGAGATAGCTACAACTAAGTCAACAGAGCCAACACCCACTGTTCGTCAGGATCTTGATCACAGCACAACAGCCAAAAGACATTTGAAAACGGAAGCTTATGAGGATACCATTGCTATTTCATGTCACTCTAGATCTGTCCAGATCAAGCCAAGTAGCATTCAACCACAACATTCATCATTAGTTGTTGGAATTACACCTACAGCAACTTCAAATTTTGGGACTACAAAAGTGCCATTTCTAACAGAAAATAATGATACTGCAAGTGTCTTGCTAACAAAAAAAGTACAGCATGAACAGAAAGATAGAATgcttttaacaattattattattgttttagtagcAGTGATTGTTCTGCTCCTCTCTGTGCTATTGATAATCATTGTTTACAGGGCAAGGCATCCAAGGACACAACCAGAATTGAGAGATAGTGCTGAAGAAATACCACTTAACTCCATTGACGAAACAGAGGATTCATCAGATGCTACAATTAATAGCTTTACAACACAAGATGATTTGTCTGTCCATGCATCTCTAGACAAAGCTAAAGAACTTATAACTCCAGCAGACATTTCATCAGATGATTTGACTGATCATGCATCTCCAGACAAAGCTAAAGAACTTCTTACCCCAGCAGACATTTCAGCAGacATAAGAACAAATGAGGTGTCTCCCAATGCAGCTGTGGATGAACTGAATCTTGCAAACATTCCTGAAGGTTTCCCTGTCTCTGGTATGGAACAGTTGTGTGATGAGAATAGAGGTAACCTGTTCTGCTTTGTTCAAAGAAAACTTGATGCAGTCGAGACCCTCACCACAAAAACATGGCGCAGTATTGGAAGAACTCTGAAACTTAGCGCtgatattttaaacttaatAGAAGCTGACTACAGAGCAGGGTTAAGTCCTACAGAAAGTCTTGTCACAAACTTCAAAACTTCAGGAAAAGAACCCACAATGAGAGAATTTGTTCAAGCCCttaaaaattgcaaaagatacGACATAGCAAATTACATCTGCAACTGGCCATGGGAGAAGCTTGCAACACAAGAGGGTCAGGACCAATCTGTAATGAACTGATTTCAGACAGCTCAAGACAAGAGAGAGAGTGAGACCAAGCAATCTCAGACCAactgagaatcaggctaaagGCAACAAGGTCATAGAACTTGCTTAAAATGTGTGTGCAACAAACGGTATTGAACTTGTTTGCCTGTGAATCAAATTGAGAGTTGGACTGAGGCACTGTGTTACTGAAGTCTCTCAGAAAGTATGGCAAAAATAgtatgttgaagccacagaataTGCACTTACATGTAAAGGTGTCGATGGTAGTGGCACTGAGGTCtcttctaccaaaaaaaaaaaacaaaaaattaaaaagtaagTCGCAAGTTAGAAGCCATAAACAGCTGTTTTGGCCTTGTTAGGCCTCATCAGCATATTGGCTTAGCTAACAAGATGATATGGCTCATGGCATGGGTTCCCACATAGAAAGATGTAATGACATACAagtatggtacacttgtgggatgtgaCTGTGATGACAAAATGATGACTGAAACGGCAAAAAtggtatgttgaagccacaaAACGTGCatcaatggtagtgacactgAGGTCTCTTCCAAAACAAAAAGTGATAAataagtgagccaccaagttaacAGACATGGAGAGCTGTTTCAGCCTTATTAGGCCTCaccagcatggcatagctaacaagttTCAACATACCATTTTTTGCCATACCATACTTGTATCTCCCAGAAAAAAGCTGGGCAGCAGAAAATAGTGGTTTAACAGGGCTGTCATAGAAGCCCCTTGTGGTGCTGGCACATGTTCTGCCAGGATTTAAAAAATTTGGACTCAATAGAAAAATCACAGTTACTGTGAATCATGTATAATGAATGTTAAGGCAATTCCCTGTTCAGAAATTGATTCATAAGAAAATTCAGAGAAAGGGAGATGGAGCAACATAGCAACCCAGGAAGTTGCAACATTAAAGCCAAGAAAGTAAATTTACATGACAGATTCAGTGAGATTTTAACCTCACCTAGTTCTTAGACTTGTAAATTA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00531	Death	Death domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000488	Domain	Death domain	Interproscan
IPR047526	Family	Tumor necrosis factor receptor superfamily member 19/27/EDAR	Interproscan
IPR001368	Domain	TNFR/NGFR cysteine-rich region	Interproscan
IPR011029	Homologous_superfamily	Death-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12120	TNFR-CYS DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0007165	Biological Process	signal transduction	Interproscan
GO:0038023	Molecular Function	signaling receptor activity	Interproscan
GO:0043123	Biological Process	positive regulation of canonical NF-kappaB signal transduction	Interproscan
GO:0046330	Biological Process	positive regulation of JNK cascade	Interproscan