Gene detail

Detailed information of ENSVTRP00000028007.1 in Madracis senaria

Genomic Location: :...
NR annotation: XP_022809545.1, uncharacterized protein LOC111346526, partial [Stylophora pistillata]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSVTRT00000029639

ATGGTTCCACACTTCACAGGCCGCAAGAAGGAGTGCGAAGGCATAACTGGTCACGTGGCTTCCAAATCTACCCGAATCGTGTCGATATGGGGCTCACCTGGTTTTGGTAAAACTTCTGTAGCAACTGCAGTGGGACATCAACTCCAGTGTAAGGGATTGCCCGTCTACTTCTTCTCCTTACGAGGACTTCAGTCAAAGACTGACCTGACATCAAAGCTGCTGAGCTTTTTCAGAAGACCGTCGACAAGAGATCAAATACCTCAGCGGCTGTCAATTGATGAGGAACTTTTCCAACTTCTAAGCGAACTTTCAGATGAATTTGTGATGATTCTTGACAATGCTGATGACTTGCTCGAAAGTGGAGCCCCGAACGTGAAGGAGGATTTTGTAAATTTTCTCGAAGCCATTCTCAGTCGAGCCAAAACGCTAACATTTGTTATTACCACAAGAGAATCTCTAGAATTTATgaatgtgcattttcaaggccaccAAGCAACCAGAATAGGGCCGTTAGATGAGTTCTTTTCTCTAACTTTAGTCTGTGGGCTACTTCCAAATGCGACGTCGTCTGACTGCATACAAATTGCGAAAATCTGCGGGCACGTACCTTTGGCCATGAAGCTGTTGTGTTCCTCCATTTCTGAAGATAATGCTCAGCCGAGTCAATTTCTAGAGTACTTCAAGGAATTTATAGAAAGGAACATTGTGGAACTGTTGGACAATCCAGACTATCCTAGTAATCTGAGATTAAAATTGCTATTTGAAACCTCTTTTCAGAGACTCTCTACACAAGATCAAGGGGCCCTAGTATCTCTGAGTATTCTTTCAGAGAATTTTAACCTCTCGGCTGCTGCAGCTGTTATGGGAGTAAAATCAAATCTCGAAGCCAAGAAGATCTTGCATAGACTTCGGAGGAAATCTCTTCTCGACTGTAGTTGCAAAGCTGAGTCATTCTCAATGCATAAATTGCTTCTGTCGTTGGCGAGAGAAAGAGGAGAAgatgaaatgaaagaaacaatGCTGAACTCAAAAGCACGCTTGTGTGCATTTTACGTCTCTCTTTTCGAGAAGCTGAATGAACAGTTCTTTACTGGACATGCAATGTCAGCATTTATTGATTTCTATGAAGAGAAGCAAAATATTATTCATAGTCTAGGAGAAGCTTGTTCCGATCCTAAGACGTGTGAAGTTGTTTTTGGTGTTTTGATGAAAGCGGAGCTCTTTCTAGATTCCCTTTTCTGGTGCGAGGGAGAAATCATTGACAAAATTTACGATTCAGCGACTGAAGCATCCAAGAAGCTTGGAAAACACGTTTTCTGTAGACAGTTACTGGTGTCCTTGGCATTTACAGAAGTGTGTTGGGGCATACACGGAAGAACGATGAAGCTGCTCACTGAAGCCGCTGACAACCAAGTGTCATGTTCTTCCTTCTCGGCAGGTAACAAAGGAAAACTATTCTGTTATAGAGGCATCTGCCAAATAGCCTCTGGGAAGTCAGAAGAAGGAGTTCAAAGCTTACAAGAGGCTCTTTTTTTGATGAATGGCAGTCCCGAACAGAGAATTCTTAGAATAACTGCTCTTCAGATACTTGCTATCTACCATCGCTTCAGGAACAACTTGTCAATTGCATCACAGCTTTACACCAAAGCCTTGCAAGAATGCAGAGCAGCAGGAGACACAAGTCTCCTTGTTATTCCTCCAGTGGAGAAAACAGAAATTCAAACTCCCGAAGGAGAGATGCCAAGAAGCAAACTGGATACCTTAACTAATCAACCTCTAAGATTACAAATCATTTGCGTTGTGAGCGAAGCAACGAAGCTTTTTACTGATAGTGATACCAATAAGAACGTTGCTTCAGAGAGTCACCCTGAAGATAACGAAAGTCTTACGCCAGCTGTGCACCAAGAAGAGCTACTAAAGAGCTACATACTCCATGGCCGTAATATGTATGGTTTGCAAAACTATTTGGAGGCCCTTCAGTCTTATCATCGTGCGCTTGACATCGGACTGAGATTATTTGGAGAAGAGCACGCCAGTACAGCTAAGAATTACTATTCGCTCGGACAAACACAATAtgagttgggcgactttacttcagcgctttaCTCTGATCAGCGTGCGCTCGACATTAGacttaaactgttcggagaagaacactcagacacagctcagagttactattcactcggagtaacacaacatgagttgggcgactttacttcagcgcttcagtctaaacagcgtgcgcttgacatcagactTAAACTGtacggagaagaacactcagacacagctgagagttactatttactcggagtaacacaacatgagttgggcgactttacttcagcgcttcactctcatcagcgtCATgcacttgacatcagagttaaactgttcggagaagaacacacagacacagctgagagttactatttactcggaAGTTATTATTCACTCCGAAAAACACAACATaacttgggcgactttactttagcgcttcagtctcatcagcgtgcgcttgacattagagttaaactgttcggagaagaggactcagacacagctcaggGTTACTTTGTATCCGGACTAACACAACATGAGTTGGGTGATCTTACGTCAGGGTTTCAATCTTGTCATCGTTCGATTAACATCATCATGCGCATGACATAG

Transcript

ENSVTRT00000029639

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13424	TPR_12	Tetratricopeptide repeat	Repeat	Interproscan
PF13401	AAA_22	AAA domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003593	Domain	AAA+ ATPase domain	Interproscan
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR051787	Family	Effector and Ciliary Development-Associated Protein	Interproscan
IPR019734	Repeat	Tetratricopeptide repeat	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR049945	Domain	ORC1/DEAH AAA+ ATPase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45641	TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870)	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan