Genomic Location: :...
NR annotation: CAH3046625.1, unnamed protein product [Pocillopora meandrina]
| CDS | ||||
| ENSVTRT00000032187 | ||||
| Transcript |
| ENSVTRT00000032187 |
| Protein |
| ENSVTRP00000030429.1 |
| Uniprot term | Description |
|---|---|
| Q96RW7 | Hemicentin-1 OS=Homo sapiens OX=9606 GN=HMCN1 PE=1 SV=2 |
| D3YXG0 | Hemicentin-1 OS=Mus musculus OX=10090 GN=Hmcn1 PE=1 SV=1 |
| Q98902 | Neural cell adhesion molecule L1 OS=Takifugu rubripes OX=31033 GN=l1cam PE=3 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00147 | Fibrinogen_C | Fibrinogen beta and gamma chains, C-terminal globular domain | Domain | Interproscan |
| PF13927 | Ig_3 | Immunoglobulin domain | Domain | Interproscan |
| PF01391 | Collagen | Collagen triple helix repeat (20 copies) | Repeat | Interproscan |
| PF07679 | I-set | Immunoglobulin I-set domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR036179 | Homologous_superfamily | Immunoglobulin-like domain superfamily | Interproscan |
| IPR007110 | Domain | Immunoglobulin-like domain | Interproscan |
| IPR036056 | Homologous_superfamily | Fibrinogen-like, C-terminal | Interproscan |
| IPR050958 | Family | Cell Adhesion and Cytoskeletal Organization | Interproscan |
| IPR002181 | Domain | Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain | Interproscan |
| IPR013783 | Homologous_superfamily | Immunoglobulin-like fold | Interproscan |
| IPR003599 | Domain | Immunoglobulin subtype | Interproscan |
| IPR003598 | Domain | Immunoglobulin subtype 2 | Interproscan |
| IPR008160 | Repeat | Collagen triple helix repeat | Interproscan |
| IPR013098 | Domain | Immunoglobulin I-set | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR45080 | CONTACTIN 5 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005886 | Cellular Component | plasma membrane | Interproscan |
| GO:0007156 | Biological Process | homophilic cell adhesion via plasma membrane adhesion molecules | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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