Gene detail

Detailed information of ENSVTRP00000033797.1 in Madracis senaria

Genomic Location: :...
NR annotation: XP_044182703.1, uncharacterized protein K02A2.6-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSVTRT00000035859

GAGTGTCCTGCATGGGGCAAAGTGTGTAAGCAgtgcaagaaaaacaatcatTTTGAAAAAGGACCCAAAGATGCCGTGGTTAACGCCTTTGAGAGCGACGAAGAATTGGAAGAGATCAGAGTTGTAAGGATAAAGCTATTGTTTGCTCAGATGCTGGTTCATCAGAAACCTGTGAGATTTCAAATTGACTGTGGAGCTAGTGCTGACATTTTGCCATGTAAGCATGTGGAAGATGTGGATCTCGAACCTTGTTCCCAGTCTCTCGTTATGTGGAATGGCACCAAGGTCAAGCCTGTTGGGACGTGTGCTCTGCCCGTTGTTAATCCCCGAACTAATACGAGGTATAAACTGAGATTCTTAGTCATGCATCTGTTAATCGTACACAAGGAGAACTTTGTTACCGTTGTGGAGAATTTGGAAAACAGTCTTGCTAACAAATACCaagatgtatttgaaaatgGCCTTGGTAGGTTACCTGGAAAGGTTCATCTGCAAGTTGACCCGGTTTGTCAAACAGTGATTTTCCCAGCCAGGAAAGTACCCGTAAAGGAAAAGGTAAAGGAAAAATTCAAAGCGGAACTCAAAAGGTTGCAGGATCAAAGAGTTATTGCTCCTGTGGATCAGCCAATTTGTTGTTGCTGTGAAAAAGTCAGACATGATGCTGACCGCGATAGTTCCCTGAAGGTTCCTTTTCATGGACATCCGCTACGCGATCTTACCCATAAAGATGTTAAATGCTGTTGGTCCGATGTGCAAGAATGTGCTTGGAGTGAAGTGAAGAGCCTTATCGCATCTGCTCCTGTGCTAGCCTACTACAAGCCTGGGGAGCCATTAGAAGTACAATGTGACAGCAGTCAAGCTGGTCTTGGCGCAGCCCTGATGCAAGCCAGTCACCCCATTGCTTATGCAAGCCAAGCACTAACAGAGACTGAGACCCACTATGCTCAGATGGAAAAAGAGATGCTAGTGATTGTTTTCGCTGTGGAGAAGTTTAATGACTACACATTTGGCAATAAGACTATTGTTTTTAGCGACCACAAGCTGCTAGAATCAATTTTCAAGAAGCCCTTGCACCGTGCCCCCAAGCGTTTGCAAGTGAGGTACAAGAAGGGAAGCAAGATGTTTCTGGCTGATACCCTTTCGAGAGCATTTCTCCCTGCAAGGGAGCAAGATGAGAACGAGTTTGAGATAATCAACATGATGAAGTATCTGCCTGTATCAGAAGAAAGGCTTCTGCAGATTCAGCTAGATACTGAAGCAGATAACTCTCTTCAAGTGCTGAAAGCCATAATTCAGAAAGGCTGGCCAGAGCATAAGAGAACCATTCCTAGTGTCATTTCTCCTTACTTCAACATGGGTGATGAGATGTTGATCCAGGATGGTCTCATCTTTAAGGGAGAACGCGTCGTGGTTCCACAAGCGTTGAGGAGTAAGCTGTTAAGACGAATTCACAACTCCCATCTTGGGGTTAATGCTGACATTAAGAACTATGTGTCAACCTGTGAGGCATGTCGAGAGTATGAGTGGGGTCAAGTCAAGGAAACAATGATGTCCACTGAGACACCAAATCGACCCTGGCAACAATTTGTTGCAGATTTTGAGCTTGAAGGGAAAACCTACTTAGTCACCTCAGATTATTACAGTGATTTCTTTGGGCTGGACCATTTAAGACCTCCTTCGTCGGCGTGTGTCATCAGAAAGTTAAAGACCCATTTTGCACGCCAGGGTATTCCCGAGCAGCTGGTGACAGATAACGGTTCACAATTTACGTCACATGATTTCCTGAAATTTGCGACAGACTGGGACATTGAACATCTGATGAGCAGTCCACACCACAGCCAGGGAAATGGTAAAGCAGATAGTGTAGTGAAGATAGCTAAGACAATTCTCAGAAAGTGCAAGTCCAGTGGATCAGATGCTTTTCTAGCCTTACTCGATCATTCACAGCGCGTCTTCAACAGAAAGGCTAGGAGTCTACTACCAATGACAGCTAACCTGCTTGCACCACAGGCAGTTCCAGACAATGAGCGGTGCCGAGCTAAGCTTGAACAGCACAAACAGCGACAAGCTCAATATTACAAGAGAGGTACTATCGGTATTGATCTGGATCCACTAAAGAGAGGAGATACTGTGAGATTGAAACTGTTCCAGTTGGGCAAGCACGAAGGGCAGAAAGGAATTGTACAAAAGCAACTGGACAAGAGAGCGTACGAGGTCGAGATGCCCTACAATGTTGCGCATCACAACAGTGTTCACCTACGTTTGACAATTGAGCCGTCACCGCCATTAACAGACGAGATACCTTATGAGATATCTGCTGAGGCACCAGAGGTGGCTGATCCCTCTTCTGCACAGTCGTATATATAA

Transcript

ENSVTRT00000035859

Protein

Uniprot

Uniprot term	Description
Q09575	Uncharacterized protein K02A2.6 OS=Caenorhabditis elegans OX=6239 GN=K02A2.6 PE=4 SV=1
P10401	Retrovirus-related Pol polyprotein from transposon gypsy OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00665	rve	Integrase core domain	Domain	Interproscan
PF17919	RT_RNaseH_2	RNase H-like domain found in reverse transcriptase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001584	Domain	Integrase, catalytic core	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR041577	Domain	Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR050951	Family	Retrovirus-related Pol polyprotein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR37984	PROTEIN CBG26694	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0015074	Biological Process	DNA integration	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K14570	REX1, REXO1, REXO5, RNH70; RNA exonuclease	EC:3.1.-.-	Ribosome biogenesis	ko03009	deepkoala