Gene detail

Detailed information of ENSVTRP00000034430.1 in Madracis senaria

Genomic Location: :...
NR annotation: XP_022782591.1, ABI gene family member 3-like [Stylophora pistillata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSVTRT00000036517

GAAATTCCAGATGGGCGACAGGCATTGACAGACGGACACGAAAATCTGGCTAAGGTAGCAGCGTACTGCGAACAGAAGTATCGAGAGGCGAACAGTCATCACCGCGCATCGGGCCCAGATAGGGCTAAAGCGTTCGAAGAAACGAGAGCTGTTCTGGAAGAGACAAAACAGTTCGCTACACAGTCGCTAGCTAGCGTTGCTTATCAGATAAATTCCCTAGCTCTCAGCATGTTGAATTTGATAGATAATCAAGCTCTGAAAGTGGAGGGTTTAGAGTCCACGGTTCATCAACTTTCACAGACTGTTGACGCTCACAAAGAAAAAGTGGCTCGTCTAAAAGTAGGAGCTCTTGGTTTCAGTAAGTCAAAGAGAAGGGTGCCTAAAATCCTGGTCCCCGCTGAAAAAGAGGAGCTCGGAGATTTCACTTACGAAAGCACACCAATTGATTTTTCCATTATGGATCATTTAGGGAATGGCGCCAAGATAAAAGGCCTTCAAGAAAATCAATCTCACTCAAGCAGCAAGAGAAAGGGAGGCAGAGGAAACTTAAGGAGGatacaattacaaaatcccccaccccctcctgtGCCCCCACCCTCTGTGCCTTCCTTAAATTCCGACCTGCCCCCACCCCCCTCAGTAGCAGACCAGTCAGCAGCTGCATTTCCAGCAGATGGTGGCACCATGGtccctccaccaccaccactccCAGGAATGACTTCTACACCATCACCCACTGACTTACCACCACCTCCCCCTTTCCCTGGTGTAGGAGGGTCAGTACCTCCTCCCCCACCACCCCCTGGCATAGGAGGATCAGTACCTCCTCCCCCACAACCCCCTGGCATAGGAGGATCAGTACCTCGTCCACCACTACCACCTGGCATAGGAGGGTCAATACCtcccccaccaccaccccctGCTATAGGAGGATCAgcacctccaccaccaccatccCCTGGTGTACCATCCCCTCTTCCACCCCCTGGCATAGGAGGATCAGTACCTTCCCCACCACCACCCCCTGGTATAGGAGCACCAGTACCtcccccaccaccaccccctGCTATAGGAGGATCTGTACCACCACTGCCATCCCCTGGTGTACCATCCCCTCATCCACCCCCTGCTATAAGAGGATCAGTACCTACCCCACCAACACCCCCTGGTATAGGAGCACCAGTACCtcccccaccaccaccccctGCTATAGGAGGATCTGTACCACCACTGCCATCCCCTGGTGTACCATCCCCTCATCCACCCCCTGCTATAAGAGGATCAGTACCTACCCCACCAACACCCTCTGGTATACCATCTCTCCCACCTCTCCCTAATATAGGAGGATCAGTTCCTGCCCCACCGCCACCCCCTCCTTTGCAAGTGCATGGTGGTACGACTCGGCTACCTCCACCAGGTACAGTGAATCtttcccccccacccccacccccaccctctGAAGAAGATTTTTACCAGtgtccatcatcactaccaatGCCTGCGCCACCAGAAGATTTGTACCAAGTCCCCTCCCTGCCATCAGGAAAAAAGAAGTCCTGTATTCCTCAAAATTATATTGAAAAAGTGGTGGCCCTGTATAAATATGCTCGGGAGCGAGAGGATGAGCTTTCATTTCAAGAAGGAGTGATCATTTACGTTATCAAGAAATACGACGATGGTTGGTTTGAGGGTGTCACAGAAAATGGTGCTAGTGGTCTGTTTCCAGAAAACTACGTGACAGTTTGCCTTTGAGAAGAGACAACTTtacctttcactctcaagatgtTACACGTTCtgcaaaagttctaaatttcttGCCATGCAAATTATGATGACTGAGAAAAAGTTCAGGAATTTTGATCTAAGGCTGCTAAAATGACCAAGATTATAATAACTACACTCCCAGAAATAATAAGTAGGGACACTTCTTTAGGAAACCGCTTGTGATGTTCTCTTGCCCCATCTCCCCTCTCTATGTTGTTTCTTGCCATTCTGTTTATAGGATCATGCagaccaacattgagaggggcaGGGGAGGCAGcaagtgtcccaacaaatttgtccGGGAGTGTAGGACCACATGCAAGTATGACTCTGCGCTTTGATTTGAATGGCCGCGCTCATAAATAATGatcattttatttaatataaagTCTTTTTATTATCCTTGACACTAAAACAGGTCTGGAAAAAAAGCTTGTTAAATgcatatatattatattattattcaacaaattgtaacactgtccaaatatggtcatattgctctcgatatttgtcatccgtattGTAAGTCGCGGCGAAGAAAACTGTCAAAAATGTCGAcagaacgattcaaatacttcaaaaaagagatttgttatcaatttgctGAAtagtaaaacaattatcctgttcaatcttgcggaatatcgcctgattttagccgacccGGCTATGGCCTagctcttcggctaagtatcagacgatattccacgcgatttcgcaggataattgttaactgTACGTAAGTATAGCAGCAAAGGATGTGTATTTTATTATATctattttcgaattaattttttaGTCTGTTCATTCACTAATAA

Protein

Uniprot

Gene family

Uniprot term	Description
Q9NYB9	Abl interactor 2 OS=Homo sapiens OX=9606 GN=ABI2 PE=1 SV=1
P62484	Abl interactor 2 OS=Mus musculus OX=10090 GN=Abi2 PE=1 SV=1
Q9QZM5	Abl interactor 1 OS=Rattus norvegicus OX=10116 GN=Abi1 PE=1 SV=3

Gene family	Subfamily
Ubiquitin Family	UBD\|Other\|SH3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14604	SH3_9	Variant SH3 domain	Domain	Interproscan
PF07815	Abi_HHR	Abl-interactor HHR	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001452	Domain	SH3 domain	Interproscan
IPR028455	Domain	ABI gene family member 3, SH3 domain	Interproscan
IPR036028	Homologous_superfamily	SH3-like domain superfamily	Interproscan
IPR050670	Family	Signal Transducing Adapter Molecule	Interproscan
IPR012849	Domain	Abl-interactor, homeo-domain homologous domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45929	JAK PATHWAY SIGNAL TRANSDUCTION ADAPTOR MOLECULE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K05751	ABI2; abl interactor 2	-	Regulation of actin cytoskeleton	ko04810	deepkoala