Detailed information of ENSVTRP00000035437.1 in Madracis senaria

Genomic Location: :...
NR annotation: PFX16680.1, Retrovirus-related Pol polyprotein [Stylophora pistillata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P10394Retrovirus-related Pol polyprotein from transposon 412 OS=Drosophila melanogaster OX=7227 GN=POL PE=4 SV=1
Q8I7P9Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1
P04323Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13975gag-asp_proteasgag-polyprotein putative aspartyl proteaseDomainInterproscan
PF03539Spuma_A9PTaseSpumavirus aspartic protease (A9)FamilyInterproscan
PF00385ChromoChromo (CHRromatin Organisation MOdifier) domainDomainInterproscan
PF17917RT_RNaseHRNase H-like domain found in reverse transcriptaseDomainInterproscan
PF03732Retrotrans_gagRetrotransposon gag protein FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR016197Homologous_superfamilyChromo-like domain superfamilyInterproscan
IPR001641DomainSpumavirus aspartic protease A9Interproscan
IPR023780DomainChromo domainInterproscan
IPR001969Active_siteAspartic peptidase, active siteInterproscan
IPR023779Conserved_siteChromo domain, conserved siteInterproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR041373DomainReverse transcriptase, RNase H-like domainInterproscan
IPR000953DomainChromo/chromo shadow domainInterproscan
IPR005162DomainRetrotransposon gag domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR34072ENZYMATIC POLYPROTEIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004190Molecular Functionaspartic-type endopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan

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