Gene detail

Detailed information of ENSVTRP00000037272.1 in Madracis senaria

Genomic Location: :...
NR annotation: CAB3997490.1, Hypothetical predicted protein, partial [Paramuricea clavata]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSVTRT00000039506

ATCTCAGCGCTCAATTCTATCTCTGAAGTTGATTTATCAAACTCCTTTTCCATATTAGATAATCTGCACGTCGATCTGACGACGACGACGTCGACGACAAGTTCATCGATTCCTGTAACTTCATCTCCTAACCTGGGTCGCAAATCGTACCCAAATCCATCCAACATCACTCGGAAGAACAAACTGACAGGATTAATCATCAATTGCAACGGCTTAAAGAGCACTAGTCGATTTACCGAATTCCAGGCATTACTTGATCTACATGACCCTGATATTGTGCTGGGCACGGAATCCAAACTTGACGAAGGCATCCCAACTTATTCTATCTTCCCATCGAATTACACTGTCTTCAGGAGGGACAGAAATTGTCATGGTGGAGGTGTTTTCCAAGCCATCAAATCAGACCTTGTTAGCATGGAAGAACCTCGATTCTCCAACGaaagtgaaattatttggaCTTCCCTTAAACTTAATAACTGTAAAACTTTATACTTGGCAAGCTTTTATAGGCCACCCAACTCTACTCCAGATGTTCTTGTCCAGCTTCATGATTCCATCAATGAAGTGTTTACTAAGACATTCAGTCATCCAAACATCGTGATTGGTGGTGACTTCAACCTTGGGGACATTGATTGGAACACAGCTCCTTATAGCGGTCCTTCTGCACAACATCAAACTCTTCTCCACCTGATTGACGATTTTTCACTCTCTCAACACGTGAAGGAACCTACCAGACCTGCCTCTGGGAAAATTTTGGATCTTTTATTATCCACCTTCCCCAACAGTGTCTCCAGAGTAACTACAACCACTGGTATGAGTGATCATCTAGCAATATTGTTTGATCTCAACTTAAAACCGACTAGATCATTCAAAGCTCCCCACAAAGTGTATGCCTATAAGCGAGCTGACTTCGAAAGCCTTGGGAACTATATGCAAAAATCATCCGATGACTTTTTTGCATCACACCCTGAGAAGAGAACTATCGACACGAACTGGAACATGTTCAAGCAATCTTTACTAACTGGGATCAGTAAATTTGTTCCACAACGACTCTCTGGTTCCAAATACAAACTCCCCTGGATTACTCACGACATCAAAAGGCAAATGCGAAAGAAAGATCGTCTTTACAAGAAAGCAATTAGAACAAAGATAACCCAGCATTGGAATGCTTTTAAGAAGCAACGAAATCTGGTATCCAAACTTGTCAAATCATCTCACAGCAATTACCTTAACGATGTTATTGGAGGCAGCCTTAGCGAAAATCCCAAGAAATTTTGGTCATATGTCAAATCCAGCAGATCTGAGAATATGGGTATTCCCCCATTGAAAGTGGGTGACAGTATTAGTGTGTCGGACAGGGACAAGGCTGAATCACTTAGTACGCATTTCCATTcagttttcacagaagaaacaTTACCACCCCTGGACATAGGTCCATCACCATATGATTCAATACCTGAattaaatttctcttctcgaGGTGTAGCTAAACAGCTATTGGACCTAAAGCCAAACAAAGCCCCAGGCCCAGACGAATTACCAGCACGGATCTTAAAAGAAATGGCAAATCCTATATCTCCGTGGTTATGCTTTATATTCCAACAGTCATTTGACTCCAACGCAGTACCATCTGACTGGTCTAAAGCCCTTGTCACTGCTGTCCACAAAAAAGACCTGAAATCCGATCCTTCCAATTATCGCCCAATTTCACTGACCTGTATCTGTTGCAAAGTAATGGAACATATCGTCCTCAGTCACATGGCAAAGCATCTGGCTAGTAACAACATAATCGTCGATGATCAACATGGCTTCAGAAAGTATTACTCATGTGAAACCCAGCTAATCACAGCTCTACATGACTGGGCTTCTACTATTAACTGTAGAAAACGGTCTGATGTTATCCTATTGGATTTTAGTAAAGCATTCGACTCAGTTCCACACGAACGTCTGTTGGCAAAATTGGATTATTATGGTATTAacggtaaaacaaacaaattggatAAGAGCATTCCTCACAAACCGCTCACAAGTTGTATCAGTTAA

Transcript

ENSVTRT00000039506

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF14529	Exo_endo_phos_2	Endonuclease-reverse transcriptase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR036691	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR005135	Domain	Endonuclease/exonuclease/phosphatase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR33395	TRANSCRIPTASE, PUTATIVE-RELATED-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0007508	Biological Process	larval heart development	Interproscan
GO:0031012	Cellular Component	extracellular matrix	Interproscan
GO:0061343	Biological Process	cell adhesion involved in heart morphogenesis	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K10865	MRE11; double-strand break repair protein MRE11	-	DNA repair and recombination proteins	ko03400	deepkoala