Gene detail

Detailed information of ENSVTRP00000042383.1 in Madracis senaria

Genomic Location: :...
NR annotation: CAH3161544.1, unnamed protein product [Pocillopora meandrina]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q810I2	E3 ubiquitin-protein ligase TRIM50 OS=Mus musculus OX=10090 GN=Trim50 PE=1 SV=1
Q810I1	E3 ubiquitin-protein ligase TRIM50 OS=Rattus norvegicus OX=10116 GN=Trim50 PE=2 SV=1
Q865W2	E3 ubiquitin-protein ligase TRIM50 OS=Sus scrofa OX=9823 GN=TRIM50 PE=2 SV=1

Gene family	Subfamily
Ubiquitin Family	E3\|E3 activity RING\|RING
Ubiquitin Family	E3\|E3 activity RING\|U-box

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13445	zf-RING_UBOX	RING-type zinc-finger	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR051438	Family	RNF E3 ubiquitin-protein ligase	Interproscan
IPR001841	Domain	Zinc finger, RING-type	Interproscan
IPR017907	Conserved_site	Zinc finger, RING-type, conserved site	Interproscan
IPR003613	Domain	U-box domain	Interproscan
IPR027370	Domain	Zinc finger, RING-type, eukaryotic	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46016	ZINC FINGER, RING/FYVE/PHD-TYPE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000209	Biological Process	protein polyubiquitination	Interproscan
GO:0006511	Biological Process	ubiquitin-dependent protein catabolic process	Interproscan
GO:0061630	Molecular Function	ubiquitin protein ligase activity	Interproscan
GO:0004842	Molecular Function	ubiquitin-protein transferase activity	Interproscan
GO:0016567	Biological Process	protein ubiquitination	Interproscan