Gene detail

Detailed information of ENSXFYP00000000605.1 in Duncanopsammia axifuga

Genomic Location: :...
NR annotation: CAH3033546.1, unnamed protein product [Porites lobata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSXFYT00000000758

AGGAACAGCCTCGTTCTGACGATCTTCAAGCATCAGGGAAGGGGAGAACTGGGACGAGAAATGTCACAGTGCCTGCGGTGTTTCAGCGGTTTTTTCAataatccaatatggcggacgaGAAAGAGTGACTTTGTGCAATATGAATGCTTTTCAAACTCAAAGCGCTAAGTTTTCCAACCACCAAAAAAACAGCTAGAAACTTTTGAGTTAGGATGCTACGTCAACTttctaaagggctaaaattagtGGTCAATCAAGGCAATTTAGCCTTTTGTAAGGCATGGCTACCCACATTGAAAGTGAATCAAGTGAGATTGGCATCAAAATTGGTTGACACCCTTGAGCCCCACTTGAATAATCTCGTAAAACAACATGCAGAGATTACAGAGAGGTTGTCAGTTACAGAGGGAGATATTCCATCAGCAAGTGAGCATAGGACATTATCCAAACAGCTTGCTAGACTTTCACCTGTAGTTAAGCTGACAAACAAAATTGAGGCAAAACAAAAGGAAATTCAGGACTTAAATGAGATGATAACTGAAATTGGAGGAGAATTGGGGAACATTGCAGAGGAGGAGAAGAGGCAAGCACTGAATGATATGAAAGAGCTGGAGGATGAGTTACTCAGGTCTCTTGTTCCTCAAGATGATGATGACGAAAACAATGCTATTTTGGAGTTAAGGGCAGGAGCTGGTGGAAAGGAAGCTTCCCTCTTCACTCATGAGATGTTTATCATGTATCAAAAGTTTGCAGCTTATAAGGGgtggaagtttgaagttttaAACATGAATAAAAGTGATCAGGGCGGACTAAAGgaagCCTCTGTGAGTGTAACTGGCAGTGGAGTATTTGGAATGATGAAGTTTGAAACCGGAGTTCACCGAGTCCAAAGAGTACCACTGACAGAAACTATGGGCCGTATTCACACGAGTACAATGACTGTGGCGGTATTAGCACAACCAGAGGAGGTGGATATAGTGATTAATCCAAGCGATCTTAAAATTGAAACGTTCAGAGCCTCAGGTGCTGGTGGGCAGCACGTCAACACGAATGACAGCGCTGTACGAATAACTCATCTACCAACAGGAATCGTTGTTAGATGCGAAGAAGAAAGGTCCCAGATAAAGAATAAGACCAAGGCATTGCAGGTACTGCGGGCGCGGCTGTACGATATTCAGCGACAAAAAGCCGAGTCAGAGAGGACTGAAGCCCGCAGAAAACAGATTGGTAGTGGAGAGCGCTCCGAGAAGATAAGAACGTACAATTTCTCACAGGGTCGAGTGACGGATCACAGGATAGGCTTGACCGAGCTCGGCCTGGAACTGTTCCTTGAAGGAGAAGACAAACTACATGACATGATCCTAGCCTTGCAGTCCCATCATGAAGCCGAGGCTTTACAAGATCTCACAAGTCAGTACACCACTGGAGATAGACACACCAGATAACAAATATTGCAGCTGGAAAGTAAGAACTTTTGAGATATCGACACGAGTCCGTTTGCTGTTTGTCTTCCATGTCGATATTCTTTTGTGTGCGAGCACAGCAACTGGTAAATGGCAGCTGAAACGGCAGAAATTTTATTGTGCATTCTGGAAGAGATGAATCATCATGAATGGGAAAACTCGAACCATTCTACACAAggaatttcttttcactcccggaGTTCCAAATTCAAGAGAAAACTCCAAAATTGCGTTTTGGATTATTAAGAAAAACAGGAACACCTAAAAGTCGCTCGCAGtagcttttttttaaatggtcacattttaggatttcatttgcGGACCTTAAAGTTTGggccatcttgtacagcataataaacagtactacagaaaaatactgcttagtagcttttttttgaatggttacacggactcaaaagttagctcCACCTGGTATAACACAGTATACCGGGTAGTTTTATTTCATTGTCGCATCTACGTATATactggtttcatccacagactaaaatgTTAAATATATATGCTAAGTATATTCGTTTGGTGGAGCGAAGCTTTGTTTGCCGCTTTTCTTTtcaccttcagtttttttttccactgaaaaagcctaaaaaatGAGAATGAAATAacagaaatttgaaaatttaacATTTAAGTGCCCTGGCGATTAATCTAAGTAGGGAGTAGGGGGTCTCATATTTTAGAGAACGTAACGCGTTTACCGAAATATACTCCAGTATCGAAACACTGTTGTTTAATGACAGAAGTCTAGacgaattttcatttttggaaGAATTACAACTGGAATAGAAAC

Protein

Uniprot

Uniprot term	Description
A5CCS8	Peptide chain release factor 1 OS=Orientia tsutsugamushi (strain Boryong) OX=357244 GN=prfA PE=3 SV=1
B3CQD1	Peptide chain release factor 1 OS=Orientia tsutsugamushi (strain Ikeda) OX=334380 GN=prfA PE=3 SV=1
Q6G5T7	Peptide chain release factor 1 OS=Bartonella henselae (strain ATCC 49882 / DSM 28221 / CCUG 30454 / Houston 1) OX=283166 GN=prfA PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03462	PCRF	PCRF domain	Domain	Interproscan
PF00472	RF-1	RF-1 domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005139	Domain	Peptide chain release factor	Interproscan
IPR000352	Domain	Peptide chain release factor class I	Interproscan
IPR004373	Family	Peptide chain release factor 1	Interproscan
IPR050057	Family	Prokaryotic/Mitochondrial Release Factor	Interproscan
IPR045853	Homologous_superfamily	Peptide chain release factor class I superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43804	LD18447P	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0006415	Biological Process	translational termination	Interproscan
GO:0003747	Molecular Function	translation release factor activity	Interproscan
GO:0016149	Molecular Function	translation release factor activity, codon specific	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K02835	prfA, MTRF1, MRF1; peptide chain release factor 1	-	Translation factors	ko03012	deepkoala