Gene detail

Detailed information of ENSXFYP00000000793.1 in Duncanopsammia axifuga

Genomic Location: :...
NR annotation: CAH3014937.1, unnamed protein product [Porites evermanni]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSXFYT00000000989

aAAGTAATTAAAGCCAAAAGTGCCAGAAATCATTTTTCTGCTGCTCTAAGAGTTATCTAACAGTTGAAGTATACCAAAATATCTGTATCCCTTGCTTAAATTTTATTCTACTATGGCAGCTGTAGGAGACAACTCCACTGAACCTGAAAACAAAACCAACTTGATCATCAATTACCTACCACAAAGTTACACTGATGCAGAATTTAAAAGTCTGTTTCAACAGATCGGTCCAACTAAATCCTGCAAGATTTGCCGACACAAATCAACTGGATACAGCTATGGCTTTGGGTTTGTGGAATACTTCACCCCCGAACATGCTCAGTTGGCCATCGATACTCTTAATGGTCATCAGATTGAAAATAAGTTTATAAAGGTTGCATTGTCAAGGAAAGGAGGTGAGAAAATCAAAGGAGCAAACTTGTATGTTCGAAATATTCCAAAAACATGGACGCCCGAAGATCTGAAGGTGCTATTCACGCCCTATGGCAACATTATCAACACCAAGATTCTAACTGATCCCATGACAGGTTCCTCAAAAGGTGTTGGGTTTATTCTCTACAATTTGAAATCTGAAGCGGAAGCTGCCATCTCTGCTGTAAATAACACCATGCCTTCTGGAGCCACAGACATAATGTATGTTCGATTTGCAGATGACAACACCACTAAACTAAAGCCTCCGCCCGGAGCTGCTGCTGCTCCTGCTGCAGGTATGTCTCAGCGACCAAGTTTCAATCTGGGTCCACCACAGCATCATCAAGGCTCAATTGGACCAATGGGACAAGCCTTGATGAATCGTCGTGCTAATAGATTCAACCCAATGGTTGGAGGACCTCAAATTCCTCCACCATCAGGGTTTAACCAGATGTCGTACTCTGGAGGCGGTGGTGCAGGTGTTACATTGTTTGTTTACAACATTGGCACCAAGGTAACTGAAAGTGCAGTTTATAAACTCTTTGAGCCATATGGTCAGATAAAGAAGATAAATGTTATGTGGGATTGGGAGAAGGGACAATGTAAAGGATTTTGCTTTGTTACTATGGCTACAATGCAGCAAGCGCAAAATGCTATCCGGGCTTTGAATGGATTTACATATGACCAGCAACCTTTGCAAGTGAAGCTTAAAACACCAAAGATGTAAGGTATTGATGTTCTGTCCTGTGTAATGGTTGAAGATTATAATCCATCAAACTGCAACACATAGTGCAAAATAAAAACTTGGTAATGTCTCATAAATGACATCTCTCagtattcaaaacaatttcagtttttattctcaataacatttttccaatattGACTATTTTCAGCAACCAAGCAGTATTTTGAACTAAAGCCACTTTTCACTTAAGTTGTGTGTCTTGGCAAGCCAAAACAACTTGTCCTTGCAGGTAAATATTGAAGAAAAATGGTTTCAAGATTGTCTAGACACTTTTCTTTGTTGTGCATACTTTTGCAACGAATGGGGGTTGTTTTTGTCCCTTATgacttttttgattttcatcaCTTTAAATAAGTTCCTAGtgtatttttcaaaacaaacactGTCAGCAAACACAACAGCATTAGCCACATTCGCTGAACAGCTTTTTAGCAGTGGAAGTTATTCCATCAAAGGCAAGTAATCAGTTCACAGATCTGTGACAAAAACaccaaatatttttaaaataaaaatatatttcacagcTTCTATGTTTgattaaactttaaaatttcCCATGAATCTTGCAAACCAAAATTAAAATGCAACACTTGATTTGAAACTGCTGGTTGCGGTTGACATAGATTGACTGAATGTATTATACTGTAGCTGCAGTTTGTTGTAAGAACTAGAGTTTCATTTCAGCGTTAGTTAAGGAAACTAAGGACCCTTATCATTAGTAAGAACTTGCCAGTCCAACTGATCTGTTTGTAAACAATAGTTGCATTATTTCTCAGAACCAGCCAGCTAGACCGGTCAATAACTGTGAAACAGGatacataatttttttataatagTGTAGGTACATTACAGGTCTTCGAAAACATGCATTCTGTTTACAGACTGATTAGTCTGCCTAGCTAGTTCTGACAAATAGTGTAAAGCCTGCTAAGTTCACAGTTATTGGATCATATTATAAGTAGATATGGTCATTTCTAA

Protein

Uniprot

Uniprot term	Description
P26378	ELAV-like protein 4 OS=Homo sapiens OX=9606 GN=ELAVL4 PE=1 SV=3
Q61701	ELAV-like protein 4 OS=Mus musculus OX=10090 GN=Elavl4 PE=1 SV=1
O09032	ELAV-like protein 4 OS=Rattus norvegicus OX=10116 GN=Elavl4 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00076	RRM_1	RNA recognition motif	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012677	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan
IPR000504	Domain	RNA recognition motif domain	Interproscan
IPR035979	Homologous_superfamily	RNA-binding domain superfamily	Interproscan
IPR002343	Family	Paraneoplastic encephalomyelitis antigen	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10352	EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:1990904	Cellular Component	ribonucleoprotein complex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K13208	ELAVL2_3_4; ELAV like protein 2/3/4	-	Spliceosome	ko03041	deepkoala