Gene detail

Detailed information of ENSXFYP00000009768.1 in Duncanopsammia axifuga

Genomic Location: not available for this species
NR annotation: XP_020631097.1, structural maintenance of chromosomes flexible hinge domain-containing protein 1-like [Orbicella faveolata]
Species Duncanopsammia axifuga · all data for this species · gene families

Sequence

CDS

Transcript

ENSXFYT00000010999

AGCGTGTAGCACTCGTGAGCAGAAAGTCTTGCGCtataaaagttgtttttttctcttcttccttccctggcGCCAAAATGAAATCTTCAAATAAAGACGATGCGTCGTCTTCTGAACAAGATGAAGAAGATGCGGCAGTTTTCATTTACGATCGGCGAGCTGGAAGCAGGCCGGTCGAGAAGGTTCAGTTAGGCGGTATTTTCAATTTCACCACTTTCAAAGAAAAGACACGACAAGCCTTCAACATACCAGAAAAGGAAAAGTTTGTAATTGTGACTACGAATCGACAAGAAATTCTGGATGACAAGACTTACGAGGAAATGGTCGATGGAAACGAAACATTGTACATTTTGCAGCGCGCTGACCAAGAACTTAGCGCTCCAACAGAAGAGCGAGTTGAATACATCCCTCATTATGATACTCTAGTCAAAAGTGGAATGTATGAATATTATGCCAGTGAAGGACAAAATCCCTTACCTTTTTCTTTTGCGGAACTTGTGGATAATGCATTGGCTGCAACTTCAGAGAATAAAGGTccaagaaaaattgaaataagacTGATGTTTGATGACTCCGTTGGAAAGCCTGTGGTTTGTGTCCTTGATAATGGTGCTGGAATGACATCAAAGGAACTGAACAACTGGGCAATCTATCGACTATCCAAGTTCAATCggcaaaatggaaagaaagTTGTAGCAGATGTTCCAAGGTCTTTAAACAGTGATATTTCTTACTTTGGTGTTGGTGGGAAGCAAGCCATTTTCTTCATTGGAGATGCTACTCGGatgattaCAAAATCAAAAGGTTGCAATGATATCCATGAGTTGTGTATATCTGAAGCGGAATTTGAGcgcagagaaaagaaaaaagagtcaATTTATGGTGGTGCTATACTTAACAGAAGGCCTGGAGACCATTCTCACATCCCTGCTGATGAGGAAAGTGTCAAGAAACTTGTGCAAGAGGAGCAACAGAAAGAAAGCTTCACTGCTGTAGTGATAACGGGAATCAAACAAGAACACATTGTTTATTTGAAGACACATTTCAAGCACTGGTGCCGTCACCTGGCGCACATTTACCACTATTACATTCATGGGCCACGGGGAAATGATGAGCCTGTAGGACGAGGAAGTACTGCCAGTCCATTCAGAAACATTGATATACAGgtGGTTCTTCACGAGAAAGGCAAACAACCTAAAAGAACAGAACTACGAGATATTAATGACGACATGCAGACCCAGTTCATCAGAACGGCGGCTTCTGTGTTTGAGTTCCGTGCCAAGGTTGAGTCTGGGGGTATTGTGGAGGGGGTCTTGCGCTACCATCCTTTCCTTTATGATCGAGAAACTTACCCAACACTTGAAGGAGAAATTCCAGTTGTCGAAACTATAGAAGAGTTTGGTGAACCAATAGAAAGAGACAGTAGAGCACCCAGAGGCAACCGGCCCATTTTTGAATGTTACTGGAATGGACGGCTTATTCCATATACTGCTATCGATGTGCTTGAGTGGTGTCAGCCACCAAAGAAGACAACCATTCCAATGGAGTGTTACAACAGATTTTCAGGTTGTCTTTGGACAAATGATGCTTTCCAAGTCAGTACCAACAAGCTGACTTTTATGGATTTGGAAGTAAAGATCAAAGATAAGAACACCATTTTCAGCAGAATCATTTTGGGACAGGAGCAAAGAGTAAACATTTCAAGAGCATTTTATGATTGGGTGAGAGAGTGCCATGAGAATCATGACAAACagGTCAAGTTTATAGGTTTTCAAGGTCAAATCAAGCGTCCAGACCTACCACAGAAACGAAACCAAAGTCCCTGGTGTGTTTTTAACTCCATTGAGTGGGATGGAAAAATCTTTAAAGTAGGACAGCTGGCATACAGAGAGGACAATCGATAAGGAGTCAAAGAACAATACCCTTGATTTGTGGAACAgtgaaaagatttcttctttttGGTGACCATGATGGAGATGTTTTTGCCACTGGAGGAGAG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A6NHR9	Structural maintenance of chromosomes flexible hinge domain-containing protein 1 OS=Homo sapiens OX=9606 GN=SMCHD1 PE=1 SV=2
Q6P5D8	Structural maintenance of chromosomes flexible hinge domain-containing protein 1 OS=Mus musculus OX=10090 GN=Smchd1 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002050 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13589 all species →	HATPase_c_3	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR038892 all species →	Family	Structural maintenance of chromosomes flexible hinge domain-containing protein 1	Interproscan
IPR036890 all species →	Homologous_superfamily	Histidine kinase/HSP90-like ATPase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22640 all species →	UNCHARACTERIZED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006302 all species →	Biological Process	double-strand break repair	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSXFYP00000009768.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.