Gene detail

Detailed information of ENSXFYP00000010898.1 in Duncanopsammia axifuga

Genomic Location: not available for this species
NR annotation: CAH3193999.1, unnamed protein product [Porites evermanni]
Species Duncanopsammia axifuga · all data for this species · gene families

Sequence

CDS

Transcript

ENSXFYT00000012140

TGGCGGTCGTGCTGATTTCAGCCATTCACAAAAGACATCGGCTTATCGCccggtcacgtgaccagactgTCAACGAAGGAATGTAATTGATGCCCAAGAGGTTACGCGAAACCGCGAAGAGATTCATGCGGAAGCTCAAAAATATATTCCAGATCTGTCGTGTGAAATGACAAGAAGCGAAGCTAGTCAGCTGTTACACGTGCAGTGATCGAAAGAACGATATTGCAGTCATTGTTAATTTGCAATAACTTACAAGCTGAATAGAGACTGATTCAATACTATGCTGTTCTGTTTAAAACTTCTGTTTCTTTTGAGTCCTGCTCTTCTAGGTGCCGCTGTCacagcattcacactgaccacAAGCAAAGAGGTAGTTGAAGTGAACGTACGACAAAATGCCACACTGCAATGGAATTACGACATTTCGGCCGGGGAAGCTTATGATATTTACTGGGGAACGAGTAGTGGAGGCACAAATGTCAAAGAACTTTTGTTCAAGAGAAATGAAGGACAATCAGAGGCTCAGCCTTCATCGAATATGCCGTCAAAGTTTGCGGGCAGGGTGAAAATTATTAAGCAAGCGACGCTCTTTATCCAGCGGGTCGATCTGTCAGACGATGGTTTCTACATTTGTCAGATAAATGGCCAGTTTGTTACACTCAGGAAGCCGATCCAACTTATCGTAATAGATCCTCCACAAATTTTACAACCATTGCAGCAGATGTATGTTTGGAATGAAGGCAACAGTACAGAGCTTGCTTGCCGTGCAGATGGAAAACCAAAGCCGAGAGTAACTTGGAAGAAAGGCAATGTTGTTCTCAAACAAGAACGAAAAGTAGCAAAGCTTGATTTTCCATCTGTTAGCTACAAAGATGCTGGCGTGTACACTTGCATAGCGGAAAATGCAGGAGGCAGGAAGCAGACACAAGTTCAAATTGATGTCCTTTataAGCCTGTGGTGCAGCTTAGACTTCAAAGCAGTTCTGACAATTCCCTCTCCTTCACCTGGTCGCTGCTGTCtgaggacagcagcaacatGTTTTTACAATATTATACCTTGAGGTACCGTACAGCTGACACTAATAGCTGGAAAACAGCCCCTAAAATTCCATCCGACACAACAACTTACCAGTTAAGAGGTTTAAAGCCATACACTGATTATGCTGTCGAGTTATTTGCAACGAATAAACACTTCACCAGCGATCCATCCCGTGCTAAAGCAAGAACTACTGAAGCAAGATGTCTGTGGAGCAAATACGACTTTTCAGCTCCCAGTGAGCCACAGGACCAGCAGGCAAACACAACTGGTCCTTACAGTGTACGACTTAGTTGGAAGAAACCAAGAGAACTCAATGGCATAGTAGTTCTGTTTAAAGTTGAAATGCTCTGGAGATTCAAGAATGTAATGGGAGACTATAGAAACGATACACGCATAATTCCTGCAAAAGTGACAAGCAGGGAAAGACGACGACGAGCTACAAATGGAGGGTCTGACTACACAGTGCTCCAATTGGAACCTGAGAGAAAAATTGAACTAAGAAATTTGCAGCCTTTTGCTTTCATAACTATAAGGGTGGCTGAGGGAACAAGAGATgctaaacaaaatattttgtgGAGTCCACTTTCTAATAACCAGACTGTTGACACCAAGGAAGGAGGACCTAGCGCCCCACGAAATGCCCAACTCACAGACAAAAAGGCAACATCTTTAAAAGTAACATGGCTTTCACCTGAGTTTCCCAATGGAATTATCAAGAAATACAGGATAATTTATTCCAACAACACTGGAAAAAACTACACTGTAGAGGTGACTAAAGGCTTGAACAATGCAACTTTATTTTACACGATCTCTGGACTCCAGAAGGACACAGACTACCAAATATATGTTCAAGCATTCACAGCTAATTTTCCTGGAGAGGTCAGTCCTCCAGTGTCAAGACATGAAACCAAACCACCAGGAGATGTTTTGGAGCAAAGCGGACCCGACAATGCTTCCCTTTATGGTGGAGTATCTGCTGGGATAATCATCTTGGCTTTTGTTATCATCGTTGTGTTGGTGATAAGGCAGAGCTAAAACAGATCATCAAACACAGCAGCATgatcaaacacaaggaagaaTGTTACAtcgctattcacctccactggGGTGAACTTTTAcgaattagtttttattttattattatttatttttatagttttttttattttatttgttattattatcattattattattatgtagaaTTTAGCACAGGGATTTTCCCTGGGGAGAAATATCCAGTCAAGTCTCATCCCGAGACCTCAGACTTCCAGCACTTTTCTGAGGATATGTGCCGATCCGAGGAGTGCCgacttttgttattattattattattattattaatattgttattttataTTTAGGCTCTAAAAAATTGAAACTAAGAAGTACATATACCTAGTTTTTTCGAGTTATGGCGAAAGACCGGTAGTATTAGAAGTAGAGGGACCACGTTGCTGCCGTACATGCCACAGGGCGTAATGAgcacgagtgagtgagtgagtgacatATACCCAGTCAATAACATGGTATATTTGCGCTATCTTTTTTATGTGTTTGGATGcccgatgaaacactctttcgagcatttgatatagcttctcaaaacaATAATTCTTGAAGAAACTAAAATCAAACGTTCAACAAATTTTGTAGTAATTATGATGTGACTTGTTTTCTCTTCATGAATCATTAATACGTTTGAAAAGCTCTACAGAAATTAAAGTTCTGCTCGCACAACTTCACATGTATATGTAATAATGAACGTTTTTAGCATATTCACTTCCTATCAAACTTTGTAATTCAATTTTACCGTAGGAACGGTATTCGGTAGTCCTATCTATTTATCTATAATGAGCAGATACAAGAGAAAATAGGTCGAATTTTTTCTCTTGGCAGACAACATGGCAACTTTTAGCAGTTATTGCAAGAGGCTGAGTTCTAAATAAGCGGGTATATTAAAGGGGAGAGGGGTGGGGCGAATATAAccggaaaaaacaaaaaggctGTATAACCATGAGCACGATCAAAACT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A4IFW2	Receptor-type tyrosine-protein phosphatase F OS=Danio rerio OX=7955 GN=ptprf PE=2 SV=1
P10586	Receptor-type tyrosine-protein phosphatase F OS=Homo sapiens OX=9606 GN=PTPRF PE=1 SV=2
A2A8L5	Receptor-type tyrosine-protein phosphatase F OS=Mus musculus OX=10090 GN=Ptprf PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000057 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00041 all species →	fn3	Fibronectin type III domain	Domain	Interproscan
PF13927 all species →	Ig_3	Immunoglobulin domain	Domain	Interproscan
PF07686 all species →	V-set	Immunoglobulin V-set domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003961 all species →	Domain	Fibronectin type III	Interproscan
IPR036116 all species →	Homologous_superfamily	Fibronectin type III superfamily	Interproscan
IPR013783 all species →	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR050958 all species →	Family	Cell Adhesion and Cytoskeletal Organization	Interproscan
IPR003599 all species →	Domain	Immunoglobulin subtype	Interproscan
IPR007110 all species →	Domain	Immunoglobulin-like domain	Interproscan
IPR013106 all species →	Domain	Immunoglobulin V-set domain	Interproscan
IPR036179 all species →	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR003598 all species →	Domain	Immunoglobulin subtype 2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45080 all species →	CONTACTIN 5	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0007156 all species →	Biological Process	homophilic cell adhesion via plasma membrane adhesion molecules	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSXFYP00000010898.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.