Detailed information of ENSXFYP00000011682.1 in Duncanopsammia axifuga

Genomic Location: :...
NR annotation: KAJ7358796.1, Target of EGR1, member 1 (Nuclear) [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9D2E2Target of EGR1 protein 1 OS=Mus musculus OX=10090 GN=Toe1 PE=1 SV=1
Q17QN2Target of EGR1 protein 1 OS=Bos taurus OX=9913 GN=TOE1 PE=2 SV=1
Q96GM8Target of EGR1 protein 1 OS=Homo sapiens OX=9606 GN=TOE1 PE=1 SV=1
Gene familySubfamily
Transcription Factors Familyzf-CCCH

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04857CAF1CAF1 family ribonucleaseFamilyInterproscan
PF00642zf-CCCHZinc finger C-x8-C-x5-C-x3-H type (and similar)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006941FamilyRibonuclease CAF1Interproscan
IPR000571DomainZinc finger, CCCH-typeInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR036855Homologous_superfamilyZinc finger, CCCH-type superfamilyInterproscan
IPR051181FamilyCAF1 family poly(A)-specific ribonucleasesInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15092POLY A -SPECIFIC RIBONUCLEASE/TARGET OF EGR1, MEMBER 1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0000175Molecular Function3'-5'-RNA exonuclease activityInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0015030Cellular ComponentCajal bodyInterproscan
GO:0017069Molecular FunctionsnRNA bindingInterproscan
GO:0034472Biological ProcesssnRNA 3'-end processingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K13202TOE1; target of EGR1 protein 1-Spliceosomeko03041deepkoala

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