Gene detail

Detailed information of ENSXFYP00000012075.1 in Duncanopsammia axifuga

Genomic Location: not available for this species
NR annotation: CAH3128505.1, unnamed protein product [Porites lobata]
Species Duncanopsammia axifuga · all data for this species · gene families

Sequence

CDS

Transcript

ENSXFYT00000013359

TCGTATACGTAGACAAATAACAGCTCGTATCCAGAATTTCTTAGCACATCGTGTAAGTTAGTTTCAATGTTATTTCTTGGAAAACACGAGCAAATTAAAAACATCACCTTCTTGTTGTAACTTGTACAAAAATTTGTCCCGCCATCTTTTTAACGGAGCAAAGCATTGGGTCGAGCTTCATCTATACCTTATTTGGGCATAGCAGCCGCAATACACATCACAAAAACTGCAAACTGGTGCAAAGCTGATGAatctttttgtttcgttttagtCATTTTACCTTTTGAAGAGCATTTACTATGGCAGACAGCAACCCTCAATTTAAAAACCTCTTAAACCGTGTTCGAGAGAAACTTAAATCGGAGAATGTGAAGCTTTGGCTTGCTCCATACACCACATCAAACGATGAACCCGGAAATTACACAGAGGAAATGGTTAACTGTTACTCGGTGACATTAGATGCTTCTTCTGAAGAAATCACAGAAGCTTTAGAGCAGCTAAGAGTTCACGCTGTGACAAAATTGCAAACAACACAAAGATTTGCCAAATCAGGAGTTGCAAACATTAAAGTTCACCTGACTGGCAATATTCCACTGGGAGTAAACAACAGAATGCAAATTGAAACTGGTTTGCATGTAAATGGCGCAGATTTTAAGAAAAGCTTGAATGCAGCATCTGGTGTAGATCCTGATAAAATGAAACTTATTTGCAAAGGACATGTTATCGAGGATGACAAATCCCTAGAGAgccaaaatgtaaaaaacaaTGGCCAGATTATGGCACTTGTATTGATGCAGTCAATTACAGAGATTCAACTTCAACAAAAGAAAGATGAAGAAACTAAAGCAAGCGTCTCACGGACAAGACAAGCAGCAGAGGCATTGTCAAGTAGAAAAGACAATTTCAGAGATGACCGTTTTTTCCTTGAGATCAATGACCAGGAAGGTCGACCAATTCAGCTGCCAAACAAGGAAAGAAAGGCCTTAACACTGGCTCTTACTTTACATGAAAAAGGACGCAGTGAcctcaaaaaaagaaattatgcaGAAGCTCTTTTATTGCTCCTTGAGGCAGAAAAAGAATTCAGTCATTGCAGAACTCAGATTTTAAGTGCTGTGGATAATTATGGTATTCTCTGCTTGGACATTGTTTGGTGTTACTTCTCGCTTAAAAGCATCATTGATTTACCAAATGCAGaggaaaaattgaaaaagtgtAAGGAATGTTTTCAAAGAAGTTATGGACAGAATCTGGAAAGGCTGACAGTTGTAAGGggtggtagtggtggtgagCTGGTCCTTTTTGTGCGACTCCATGTCCTTGAAGCTGTCTGCGCATATCACAAAGGAGATCTCACTACTGCTGAGACATGCTTAGATAAGGCTGATCTTGTTCAAGAAAAATTGCATATCGACAAACAACAACTGACCCAATTGTTGCTGATGGGATTTTCGGAGTCAGAAGCACGGCTTGGTTTAAGAGCTTGTCAGGGCGACTTAACCTCAGCCGTGGATTACATTACACAGAGAAGACAGgaaaaacaaaagagaagagAGAaggaagagaaagaaagaaaacgaaaaagacTTGAAAGAAAACTAGGAAAGACTGCAGCAGGAGAATGGGTAAATGTGGACACGTATAAAGCTCTTGTAGAGATGGGGTTCTCCGCAAAACAGGCAGCTTCAGCTCTGAGACAGGCAAACAATGATGTCAATAAAGCACTACAAgttcttcaagaaaatccaGATATGCTGGATCTTCCTGATGATAGAAGTTCGGCCGCGTCATCTTCCAGTGATGTCCAAATTTCTGATGAACATGTTGCTCAAGCCGGGTCCATGGGTTTTGCAGCGGAATCTTCTAAGGAGGCTCGGAAGCGATGCCATGCTGGCGGAGTGCCAGTATCACAGTCAAGTAAAGATGAATCCCCCGAAAGCCATAGCAAAGGAGAAGAAAAAGTCCGGGATTTAAAAAAAGCTGTGAATGAACTCGTACCAGATCTCGCCATCGAGGACGAAGAAGATCATTTGAATCTGTCGCTGGAAGAGGAAACTTCCATCATCGCTGAATATCGAACACTTCTTTTATCGGCTGGCTACAACACCAGCTCCTCTGCAATGAAATCCTAACAACAATGTGAAAAAATTCGCTCTCACAAAGTTTCCACAATAACAGTTTTTTCAATAGATACAATAGCTGCGTTTACACGGTACACTTTATCCCGGTAAATGACCTTTTTGCCACGGAAAAATCCATCTAATACATGTGACCAACATTCCCGAGGTAAATTCTCAGCAGACATATCGACTAAAGATGCTATGACACCTGGCAAGAGCTGTTGCAAGAGAAGTTGCGGGTGAAATCGTTGAAATTGCGCCCGTTGCGACCAACGAAACATTGCGTTGCGAGTTGCAGAAAATCAAAAAGATAAACACGTCTGTACTTTTCGCGATGTCGCGAGGCAAGTTGCGCGCGTGTAACGCGTGTAACATGTCATCTGCATCTTGTCTCGCGATGCTCTCTAACAGCACCTAAGAATCGGCTATGACATTTACCGTGGTAAAAGCTGGGATGTCCCATGGGTTCTTGAGGTAAATAAACTAATCACATGCTCCGGCCGTTTGACATAAAAAAGAACCCGCAAAGTGAATTTATAGAGCTAGGATGagtttataaattattttaacaTGATGAATCGTGTTTACAATGTTGTAAGAATTTTAATCACTGAAGGGCTGTTTTATTATTGTGTAAACCAAAACCCAGGGtcctaaaataactggtaagatcatgctagctgtgtgctcaacatctgcctcagtttagatgatcgcgtcattaggcggtgacgttaagccgttagccttgtctcctacatttgtcagttgtctttctcgtaggggacgttaaagatcccatagcactcttcgcaaagagtaggggacgtggttcccggtgtctgtggtctgctttgtttaagttacattCTGCATTAAATGTAAACAggattagcagtctggcaaagtcccccgaacagtgttgtaaagcgcatttgagtatcacAGAAAGTGCACTATATAAgtaacttgtcagaaattagcaggggagTGGAAAATGGTGGAGGATCA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P54729	NEDD8 ultimate buster 1 OS=Mus musculus OX=10090 GN=Nub1 PE=1 SV=2
Q9Y5A7	NEDD8 ultimate buster 1 OS=Homo sapiens OX=9606 GN=NUB1 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008077 (this species only)
Ubiquitin family	UBD\|Alpha-Helix\|UBA · all ubiquitin genes in this species
Ubiquitin family	ULD\|UFD/UBQ\|UBQ_Other · all ubiquitin genes in this species
Ubiquitin family	ULD\|UFD/UBQ\|UBQ_PIM · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00627 all species →	UBA	UBA/TS-N domain	Domain	Interproscan
PF18037 all species →	Ubiquitin_5	Ubiquitin-like domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR039749 all species →	Family	NEDD8 ultimate buster 1	Interproscan
IPR000626 all species →	Domain	Ubiquitin-like domain	Interproscan
IPR015940 all species →	Domain	Ubiquitin-associated domain	Interproscan
IPR041207 all species →	Domain	NEDD8 ultimate buster 1, ubiquitin-like domain	Interproscan
IPR009060 all species →	Homologous_superfamily	UBA-like superfamily	Interproscan
IPR029071 all species →	Homologous_superfamily	Ubiquitin-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12948 all species →	NEDD8 ULTIMATE BUSTER-1 BS4 PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:2000058 all species →	Biological Process	regulation of ubiquitin-dependent protein catabolic process	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSXFYP00000012075.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.