Gene detail

Detailed information of ENSXFYP00000016603.1 in Duncanopsammia axifuga

Genomic Location: not available for this species
NR annotation: XP_020632933.1, ADP-ribosylation factor-binding protein GGA2-like [Orbicella faveolata]
Species Duncanopsammia axifuga · all data for this species · gene families

Sequence

CDS

Transcript

ENSXFYT00000018634

GTGGAATTGTTTTCCGTTTCAAATGTTGCACGCTATTAAATAGCTCTGTTTGATCACAGAACACACGGTGGTGTTGAATTTTTGGACAGGTTATGGAAACTCTTGCACTTGCCCTATTAAAGGACACTGTTGACTGGCTTGCAAATAAAGGCAGAGATGGGAGAAAACTGGAAGACTCCATCGAATCGCTGGACCGATCATTAGCTTCAAAGAAGGGCCAATCTTCATTGGACCTTCAAGACAGTATCGCCAAATTAAAGGAAGGATCTCAGCTGCTTCAAAGTAAAAACAAAGACCAGGATACAGAAAGTACTGCTGCTTTAACCGAGAGTCTGCACGGCTTAAAACTTACTGAATTAGATATTTCAGATCAACAGGCACAGAAGAAGTTTAAAGAAGCTCAAAGGAAAGCAACAGACGCATTCTACGACGACACAAAAAGCACGTTGTACCGCGTTACAGCAATGGTTATTCTTGTTGTGGCGACGATGCTTGAGAATGTAGACTATCCTACAGAAGCCTTGTTAGAGTGTATGCTTTATCTCGAAAAGCTACACTCTATGCCAGATGTCAGAAAGAGTTTTCAGATGATTCTCAACAGAGTAAGGTCTCTACGTACGGATTATGTCCGCATTTTTACCTCAATCTGTTTTGTTAATCAAGCTATCTACGAGTTCTCTAAAACAGCTGGGAGACCCGAAGGCCAACCTTGGCCTTGTGTTAACGacggaaaaaacgaaatcaataTAGTGACTGACAAAAGAGTACCTACTGTACTGGAATacctaaaaaaaggaaaatcaaaacgtCAACAATCACAGACAAGTGAACAACCCAGATCAGAAGTTTCTGAAAGAAGAATAAGAAGATGgatgagaagaagaagaagaagcagagatgataatgacgatgatgaaAAACTAGGAACTTTAGAACGTCCACACTCAATGACAATTGAAGGTGAATCAAGATCAAACTCCGACCGCGGTGGATCGCCTAGATCAACCAGATCATATAGGATACAAACTTCAAATTCTGACCGCTTTGCATCACCCAgaagagaagaaagaagaagGATTAGCAGAAGAAGCCGAGATGATGATGACCATGATAATGATGACGAAAGCATTTCTTCATACAGCGAAGAAATGCCCTTATCAAGTGTCCGATCAAAACTCAGTGATAAGATGCAGTACGAAAAAATCGAAAATGACGATGgccatcaaccaatcagaatagcctTTGAAGATGACGATTTAAAACTAGGCCCTTCACGATATTTTGGCCAGCAGCCTGACAGTGCAGGTTCTTTGCAAGATTTAACTTCTGAAGACATTGAGATTTTTCCACCCAAATTATCCTATACAGCAGGCGAGGTCAGACCAAGGCATCGGTACCAGGGATCAGAGATACATGATGTAACATCTGAGTACATGGCAACGATACCAAGGCTAGCGCCTGAAATACGGCCAACTGAACGCACCCGAAATAAATCAAACAGGTCGCAAGTAGCAGGTGAACCACCAATGACAGTTCTTGATAAAAATGGCATCAGGATAATGTTCCATTTTACCAAGACAACTACAGAGCTACCTAGAAATGACCTGTTGTTTGTCATGATCTCCATCATGAGTTTTTTGCCTTCAGCTGTTAACAATTTCACGTTCCAGGCTAGAGTACCAAGGtcaatgcaaataaagcttCAGCGTCCATCAGGAAACAAATTACCACCACATATCCCAGGCTCCCCTCCACCTACCATTCAACAGGGTATGGTGATAGCTAATCCTAGAAAGGAAAAGATAACATTAAGATACTTTGTAAAATACCAAGTTGTTGATGGAGAAGAGATAACAGAACTAGGCGAAGTAGGTTTTCCTACTGCTCTGGAATGACAGACATAATCCGTTAGCTTCTGCCATCTTCGGAGATCCACTGCGTCAAATTGTGGTGTCTTTGGTTTTGACTCGCTGAGTTAAATAATCTTTAGCTGTAAATTTAAAAGCATTGAGCAAAGAAGACGCTTTTATCtatgttgttgttcaattttatccttggttcaatttgatttttcattgttcttttcttttctaatatatgaaaatatcaaacaaaggaaaatcaaaattgaaccgtaccgaggataaaattgaactacaacatctaATTTGGATGTACACATGTAACAAATCTTTCTTGATTAAGGTAAAAGCCCCACACATCCCTACGCTATTTAAAGTTTCATTCAGCTACACTTAAAATGATGGTTATTAAGATGTCTCAACCCAACCTATCCAAAATGAACACTGAACAAGGTTTTGGACGATAGAATATTCTGTTTCGGACGCTTTCATTAAGGGTACAATAAAGAGGTAGAAGTGAACGTTAACTTCAATATTACTTCCTTACAAAACGTTCGGGGGGGTATTCCTTTATATCAACTAtataaagggtatggtttttgagtcgttttggtctgataacgggtatagattttgaccattatggtctgaaatcgggtatggttttcaaaggaACCACGAGAGCCTATAAACGTACGTGTCTTgccaactccaaatgaataagagagaaagagaaataaccaaaaaaaatcattagagctgaattttaacaaatctgttgttggtgttctaacctaagcgatgttgacataatttaggcctttgcaaacatatatgtcaggtctgaaaacgggtatggattttagaggccaggtctgaaaacgggtatggaaaatggcattttGGAGAACGggcagcacacccccaccatgaattccaaggagtacccccccccccccccccaaaaaaaaaaaagtctactCATAGGTATAAACCCACAATAGATCTGGTCAATTCAATTCAACTAAATCA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8BMI3	ADP-ribosylation factor-binding protein GGA3 OS=Mus musculus OX=10090 GN=Gga3 PE=1 SV=2
A0A0G2JV04	ADP-ribosylation factor-binding protein GGA3 OS=Rattus norvegicus OX=10116 GN=Gga3 PE=1 SV=1
Q9NZ52	ADP-ribosylation factor-binding protein GGA3 OS=Homo sapiens OX=9606 GN=GGA3 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0062206 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02883 all species →	Alpha_adaptinC2	Adaptin C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027422 all species →	Family	ADP-ribosylation factor-binding protein GGA1-3	Interproscan
IPR008152 all species →	Domain	Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain	Interproscan
IPR013041 all species →	Homologous_superfamily	Clathrin adaptor, appendage, Ig-like subdomain superfamily	Interproscan
IPR008153 all species →	Domain	Gamma-adaptin ear (GAE) domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45905 all species →	GOLGI-LOCALIZED, GAMMA-ADAPTIN EAR CONTAINING, ARF BINDING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005802 all species →	Cellular Component	trans-Golgi network	Interproscan
GO:0006886 all species →	Biological Process	intracellular protein transport	Interproscan
GO:0006893 all species →	Biological Process	Golgi to plasma membrane transport	Interproscan
GO:0031267 all species →	Molecular Function	small GTPase binding	Interproscan
GO:0034394 all species →	Biological Process	protein localization to cell surface	Interproscan
GO:0016192 all species →	Biological Process	vesicle-mediated transport	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSXFYP00000016603.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.