Gene detail

Detailed information of ENSXFYP00000019483.1 in Duncanopsammia axifuga

Genomic Location: not available for this species
NR annotation: XP_020626486.1, cytosolic Fe-S cluster assembly factor NUBP2-like isoform X1 [Orbicella faveolata]
Species Duncanopsammia axifuga · all data for this species · gene families

Sequence

CDS

Transcript

ENSXFYT00000021682

tttttttccccaaaacgAAGTCCGTGCATCCCAGTTTTTTCTTTAGATTTCTGGCGCTCGTGCGCCCcgcgccccgccattttgaaagcggagaagaccctggggatGAGgttgctgCGAACCCAGTCCTCTAGGTTTTTCGCGTCCAATATGGCGATCCGGATGGCTTTGTGCGTTGTAAAAATAGCTTTATCTACTGAAGCGAACTTCGTTGGACTATAGTAATATTGCAGCTATGGAATCAGATGGTGACAAGGCGACAGCAGTTGGGTGTCCCTCAGAAACGtcacaAGGAGGTAAGGCAAGCATTTGCCAAGGATGCCCAGGACAATATCTTTGCAGTCAGCAAGGAGGTGAGGACCCAGACCAAGAAATGATCGATTTAAGAATGAATGCAGTCAAACATAAGATTCTTATCTTGTCCGGAAAAGGAGgtgTTGGTAAATCAAGTTTGGCAGCAACTTTAAGCATGGCTCTAGCCAACATGGGTAAAAAGGTGGGTCTTGTTGACCTGGATATTTGTGGTCCCAGTGTACCCAAGTTAATGGCAGTAGAAGGAAAACAAGTTATTAACTCATCATATGGCTGGATTCCTTTGAAATCTCCTCATTTTGATGTGAAAGTCATGTCAGTGGGCTCCTTGTTGGAAAAAGCAAATAATGCGATCATATGGCGTGGACCTAGAAAAACAGGTTTAATCAAGCAATTTCTCAAGGACACCTACTGGGGTAGACTTGATTTTCTTATCTTTGACACACCTCCTGGGACATCAGATGAACATCTGACGGTAGTGAAAGCACTCAAGAACGTCAAACCAGATGGTGCAGTGGTCGTGACAACGCCCCAAGAAGTGGCGCTGGCCACCATTCGCAAAGAGCTTAACTTCTGTCGCAAGATGGATGTCAACGTGTTGGGCATCGTAGAGAATATGAGCGGTTATATTTGTCCTCACTGCCAGGAATGCTCAAACCTATTTTCAGCAGGTGGCGCAGGTAAACTTGCAGATGAATTTGGCATCAATTTTCTTGGCAATATCCCGCTTGATCAGAACCTTTGTGTTTGCTGCGAACAAGGTTCAAACATTTTCGAATCCTTCCCAGAGTCACCCGCGGGGAAAGCCCTACAATCTGTAGCTTCCGTGTTAACTGAATTATTAAAACAGGAGGTGATGTCATCATGACAGCGAAATGCACCAATAGGAACATAACCCGTTGTCATCACATGACGTCGACTGTCAGTTCCAGGTCCCTTCCAAATTGTGATTTTGGGAAAGAGGGTGCAACAAATGGTGTAATTACTCCGCGTTCAAATCGCTTTCGAATCGCAATTTAAGGGAAGGCTACAGACGTCATCCtcattttgtaacatttttaGTACATACGAAAACaatggatagcgttgttggcgcgttCTGAtcggctactgaaactcgggatagcaaggcaaatgctattcacctccaagcatttgcgcgcgaaaattgcaaCCATTGTTAGGAATtcaatatccaccactagcctcCTACACTTCGATGAACAGCTGTTAAATATCCCGAAAGACCTACCctacactcccagagtcaattacaaGAGTTGTAGTATAGTGCTGACTTATAagtttgtcaacaaaatttaatggtgccacttgtttttcaatattttacaaaatgaaatttggaattttttttaattttttaattttatttttggcactcttggggttaaagggttaagccaTATTCCTTATAAGGTGTCATGACCTCATAGTCAACGATGCAAGCTAACGACAATATTTTTTGTGAAAACGTGGAATTTGCGAATAAAGATGGTGATGGTATAATGTGTCATTTTCCTTGAGTGAGCACCATCTAATCAAATTTGCCTGAAACTGCAATATTCTGTGTATCCTGCAAGATGCAATAGTGGTCATACTGCAGAGATTGCATATTGTGTCCATTGTAGACTATACTTGGTTTTCATCAATAGGTCAaaacaaatttcagaaaaaTGCGAGACTAAGTATGCATCCGCCATGACGGCCATAAAACTGATACAAGAAATAAGGCAGTTTATAAAACAAATATGACCAGTTTTGCCTTCAGAACTATTCGTTTAAGGTGAAACTTTTAAAAAGCTATAGTTTGTGAAAATTgaaaagaaagccaaaaaattaaaagctt

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q7S8Z0	Cytosolic Fe-S cluster assembly factor nbp35 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=nbp35 PE=3 SV=1
Q6C7A6	Cytosolic Fe-S cluster assembly factor NBP35 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=NBP35 PE=3 SV=1
P0CO89	Cytosolic Fe-S cluster assembly factor NBP35 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=NBP35 PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001354 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10609 all species →	ParA	NUBPL iron-transfer P-loop NTPase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019591 all species →	Family	Mrp/NBP35 ATP-binding protein	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR033756 all species →	Family	Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23264 all species →	NUCLEOTIDE-BINDING PROTEIN NBP35 YEAST -RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0016226 all species →	Biological Process	iron-sulfur cluster assembly	Interproscan
GO:0051536 all species →	Molecular Function	iron-sulfur cluster binding	Interproscan
GO:0140663 all species →	Molecular Function	ATP-dependent FeS chaperone activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K03593	mrp, NUBPL; ATP-binding protein involved in chromosome partitioning	-	Mitochondrial biogenesis	ko03029	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.