Gene detail

Detailed information of ENSXFYP00000024072.1 in Duncanopsammia axifuga

Genomic Location: not available for this species
NR annotation: CAH3161050.1, unnamed protein product [Porites lobata]
Species abbreviation DAXIF · all data for this species · gene families

Sequence

CDS

Transcript

ENSXFYT00000026876

CATTTCTAATGCTGAATGTTTGATGCCAGGAGCTTGTTGTTTGCTATAGCATGCTTAAATGTTTCgttttctgtcattttttacGATATGCTGGCAGAACTAAAGGAATTAGACGAATCAAGAGCATGGCCACGGTTGTTTCAACGAGTCAGTTGGGAAGCAAGTCAGAAAGCTGGGGCGCTGACAGTGGCACGACTTCCAGAAAACAGACAACTAAATCGGTACAGAGATGTTTTACCATATGACCACAGTCGGATTATTTTAAAGGAAGGATCTCCAGACTATATAAATGCCAATCTTGTTGAGGTTCCAAGGTTAAACAAATCCTACATTCTTACTCAGGGACCCTTGCCTCATACTGCGAAGCACTTCTGGCAGATGATATGGGAACAAAACACTGCTGCTGTTGTGATGTTAAACAGAGTGATTGAGAAAAATCAGATTAAATGTTATCAGTACTGGCCGTGTGGAGCATCATATGGTCATGTTGATCAACTGGAGTTTGGAAATTTCAAGATCTACTACATTCAGGAATTGCGGAATGAGTACTTTACTATCAGAACACTGGAACTGGAAAATATGCTAACAGGGGAAAGACGTTCCATAGATCATTTTCATTACCTAACATGGCCTGACTTTGGAGTGCCCACGTCACCATCCACTTTTCTGGCATTTCTATTTGAAGTTCGCAAGGCAGGAGTGCTGTCTCCAGACGTAGGACCATGCGTAATACACTGCAGTGCTGGCATAGGCAGATCAGGAACATTTGTCATGGTAGATACAATCTTGAAAGAGATTGAATACACAGGGGAGATGGATCAGATAAGCATTACCGACGTGCTCTTAGAGATACGTCAGTACAGAGTAGGTCTTATTCAAACGCCAGATCAGCTACGCTTCACATATCTGGCAATTCTAGAGGGTGTCCGAGTTCTGATGCCAGAAATATATCAGAGAGCTGTGAACCATCACTTACAGAGTAATGCTGGGGAAGATGATGATCTGGAAGGTGCTAAGCAAAATAGTACACCAGCTGATGACAAAGAGGATTCTGGGGAGGAGACACCTCCCCCCTTGCCACCACGCCGAAGGCTTgaagctgctgctgctgctgatgaACCTGACACAAAGAGAAGCCGTCCAAGTGAGCATGAACCGGAAGCAGAAAAGGATGTATTCTCAGACAGCAGTGATGGCTCAGATGAAATCATTAACTTGTCTTCATCATCAGAATCAGAACCTGAGGAAGAGACTGTCcaggacaaaaaagaaaatatagacAATGCAGAACCTTCGCAGGTGCCCACCAGTGAAGACTTTAAgAAAAAGAATGAACTTTATGTACAATCTGAATTACCTCAACAAGCAGAAGAAGGAGAAATGTTGCTTCAAAAGACAGAGGTACAGCAAGGAGATAAAGAGGTACAGCAAAGAGAACCACCTCAAGAAACAGATGCAAGGTTGCCAGAAACAAATGACAGATCAGATGGAGGTGAAACGAAGGAAACAGACAGCACAACTGAAATACGCAGGCGAAGAAGAGAAGAACGGAAACAAAAAATGACAGACCTTGTGGAAAAcataaagaaaaatgtaaaacgAGAGGAAGATGCAAAAGTGTGGAAATCCAGACTGAAGAAAACCGTGATTGCTGTAGCAGTGTGTTCTGTGGCATATATCACATTCAGATACTTGACCACCTGAAAATTTACTCTTCATGCTGTATTCAAGTGTATTTTTTTCATTGTACTTCAAGTACTGACCATGGTCACACTAACGTTTCAGAACCAGATTTCAAACAGTTCTTAAATGATCCACTCCTCCAAAAAAGAGAACTTAACTCAACATACACTGGATTTTTTATTCATGTGAAGTCACatgtacatttatttttacatatTAATACAAGTCAATTCagattcaatttttttaattattagcaTATTCCCCTGTTTATATTATCAATTTAATATGTACAGTTTGCACAGGTGTTGctgaaaagaaatatatttaaaaGAGGGAGGTAGTCTTTGTGCAAATGTGAAATTTCCAAGTGTTGTTACCAGAAATAATTGAAGTATCAGCTTTGTGATGCCAAATAATGTTAGTAGAAAACCTTACTcttaatttttagtttttatcgTATTTTTATTAATACTTTGTGTGTCAATAAAGTTCTTTTAAATGAGGTTTAGTTAAGATCATTGTATGGAAATTGTACTGGTGTCTCTAAACATTAAATCAaatgctcctatgagccaattcTTAAATATGGAACTCTCTAAATAAGAGATTCTGCACACCTTTGGACCCTCGCTGTACCAGggtaa

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O13016	Tyrosine-protein phosphatase non-receptor type 1 OS=Gallus gallus OX=9031 GN=PTPN1 PE=1 SV=1
P18031	Tyrosine-protein phosphatase non-receptor type 1 OS=Homo sapiens OX=9606 GN=PTPN1 PE=1 SV=1
P17706	Tyrosine-protein phosphatase non-receptor type 2 OS=Homo sapiens OX=9606 GN=PTPN2 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005274 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00102 all species →	Y_phosphatase	Protein-tyrosine phosphatase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029021 all species →	Homologous_superfamily	Protein-tyrosine phosphatase-like	Interproscan
IPR000387 all species →	Domain	Tyrosine-specific protein phosphatases domain	Interproscan
IPR000242 all species →	Domain	Tyrosine-specific protein phosphatase, PTPase domain	Interproscan
IPR051985 all species →	Family	Non-receptor type tyrosine-specific phosphatase	Interproscan
IPR003595 all species →	Domain	Protein-tyrosine phosphatase, catalytic	Interproscan
IPR016130 all species →	Active_site	Protein-tyrosine phosphatase, active site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46047 all species →	TYROSINE-PROTEIN PHOSPHATASE NON-RECEPTOR TYPE 61F	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016311 all species →	Biological Process	dephosphorylation	Interproscan
GO:0004725 all species →	Molecular Function	protein tyrosine phosphatase activity	Interproscan
GO:0006470 all species →	Biological Process	protein dephosphorylation	Interproscan
GO:0004726 all species →	Molecular Function	non-membrane spanning protein tyrosine phosphatase activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0019901 all species →	Molecular Function	protein kinase binding	Interproscan
GO:0035335 all species →	Biological Process	peptidyl-tyrosine dephosphorylation	Interproscan
GO:0046426 all species →	Biological Process	negative regulation of receptor signaling pathway via JAK-STAT	Interproscan
GO:0070373 all species →	Biological Process	negative regulation of ERK1 and ERK2 cascade	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K05696	PTPN1, PTP1B; tyrosine-protein phosphatase non-receptor type 1	EC:3.1.3.48	Protein phosphatases and associated proteins	ko01009	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.