Gene detail

Detailed information of ENSXFYP00000024553.1 in Duncanopsammia axifuga

Genomic Location: :...
NR annotation: CAH3185248.1, unnamed protein product, partial [Porites lobata]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSXFYT00000027357

ATGTTCCATTTTAGTATTGAAGAGGGATGTGTGTAtagcaatcttggcaatgctttttaCAGTCTTGGTGATTTCAAGAAAGGCATAGAATACCATAAAATATCTCTCAGTATTGCGAAAGATCTGAGATACAAGAATGGGGAACTAATTGCGTATGCCAGGCTTGGTGATGGTTTTAGCAggctcggtgatttcaacaaagccataGAATACACCAACCTATCTCTCAGTATTGCGAAAGATCTAGGAGATAAGAATGGGGAACGAATTGCGTATGCCAATCTTGGCTTTGATTTTCAAAATCttggtgatttcaacaaagccataGAATACACCAACCTATCTCTCAGTGATGCGaaagatctgggagataagAATGGGGAACGAATTGCGTATGTTAATCTTGGCGTTGGTTTTCGCGggctcggtgatttcaacaaagccataGAATACGACAACCTATCTCTCAGTATTGCGaaagatctgggagataagAAAGAGGAACTAAATGCGTATGCCAATCTTGGCTTTGATTTTCAAAATCttggtgatttcaacaaagccataGAATACGACAACCTATCTCTCAGTATTGCGaaagatctgggagataagAATAGGGAACGAATTGCGTATGTTAATCTTGGCGTTGGTTTTCGCGagctcggtgatttcaacaaagccataGAATACTACAACCTATCTCTCAGTATTGCGaaagatctgggagataagAAAGAGGAACTAAATGCGTATGCCAATCTTGGCGATGGTTTTCGCGggctcggtgatttcaacaaagccataGAATACCACAACCTATCTCTCAGTTTTGCGATAGATCTGGGAGACAAGGCCAGGGAGCGACGTGCGTATGGTGGTCTTGGCATTGACTTTCAatgtctcggtgatttcaacaaagccataGAATACACCAACCTATCTCTCACCCTTTTCCGTATTGACTTAAGTGCTGCTAAATTGACTTTATTTTACACAGGTTTGACTCCTGCCTATGTCCGGGCGAGAGGTGAGAAAGCATGTGCAGCATACAATAGAGCTCTAGCTAATGGCAGGACCTACGATAAACGTGTCAAGATTTTACTAGTTGGTCAAGACCGTGTTGGCAAAACAAGCGTTGGTAATTGCTTGAGAGGTGAACCATTTAATAAAGATGAACCCAGTACTGATGGAGTACAAATGTTTTCCCCTGTCAAGAATGCTGGAACAGAGGGCTGGAAAAATCCTGTATGCCTTGAGCATTCATCTGTATTTGATCACAAGATTACTACAAAGATAACTAGGGAATTGCTCAGCACACCTGTTGAAAAACCAACAAATAAACCACCAAGTGAAAATCAAGCGAAGGAGAAACTGAACATGTCCAGTGGAGATGGTGAGCTCTttttttttgtagaAGAGAAACAAAGTGAAGTTCAAGAGCAACCGCTAAATGTTGCACCAAGGAATGTAGATACCATACCACAAGAGGTTGCCTCACTCTTAGAAGATCGGCTCAAGGAGAACCAAATTGAATCAGAAGACAAAATATGGCCAGTCATTTGGGACTTTGCAGGACAAGACATCTTCCGCGCCATACATCCCATCTTCATGTCTCCAGAGGACATTTATCTGCTAGTTGTTGATCTCACTAAATCACTGAGCGCCACAGCCGAGTGTCAAGTAAAACTGCAGGGTCACCCAGAGTACCTTGTACCAGCACGTGATAGGGAGGACACCAATCTCGATCACATTATGAGGTGGATGGACGTGATTCACTCTTTGAAGAACTGTAATGAGAATGCTTTGTCAAATTCTGATTTCTCGCTTCCTCCAGTCATAATTGTGGGAACCCATGCTGACCTTGTGGAACcaagaaaagaaattggaataTTAAAAAGAAAGTGTGTAGAAGTATTTGAAAACTTTGCTGAGCACATCGTTAGGTGTCTACCCATTGATAACACTAAGGCTGGTAGACCAGGAGACCAGGCCAGACCAGACCAGGAGCAAATAGTTATTTTGAGGAAACAGATACTGGAACTAGCCAATGATATGCCGCATACACAGAAAGAGATTCCTTTGCAATGGCATCGTGTAGAGAAAGAAATCAGTGAGCCTGCTTGGCAAGAAAAAAAGTATGTCCAAAAGAAAGCTTTCAAGGAGCATATTGCTTCCCAATACTGCAAATTTGACAACGAGGATGACTTTGATGAATTTCTACATTTTCTACATGCCCGTGGTTCTATAGTTTACTACGAACATACCGGCAACAAGGATGGTCTGGTTGTTTTGGATCCCCAGTGGTTAATCAATGTTCTAAGCGAGATCATCAATGCGAAGTCTGGTGATGATGGGCCGATGTGGATTTTACAAGATCGCAAAAAGCTACAAGAAAAGGGGGTTCTTAGCAGACGGCTGCTTGATCTGGCCTGCAAAAAACTGGAACTAGGCCCCATTAAAGAGTCCTTGATTTCTCTTATGGAAAAGTTCAATCTAATTTGCAAGTGGCCAGCGGTGAAACCTGAAGATTCACTTATTCTTGTCCCATGTATGCTGACGTCAACACACGAAGAAGGAAATACAGTGGACGAGAACGGTTGTGCACCAGTGTACCTCTTTTTTGTTGGAACTAATTATGTTCCAGGTGGGCTTTTCTGCCGACTTGTTGTGCTATTCGGAAGATGGCTCGCAAATCCCAAATATACAAATAGGTACAAGCTACACGCCAATAAAGCCCGATTTGCACTTGATGAAAACCATACTCTCCATTTGGCATGCTACAAGACAGTCATTAAGCTGTCCATTTCAGTGGCTGACTCCTCGCGCCCAGTACATTGTGCAAATGTTGTGAGCCATTTAACGGATTTCCTGGAGACACTAAGAAAGGAGTGTCACTGGCTGCATTCGATGTCCACGGAGGTGCGTGCTCGATGCACAATTTGTTTAGGGGAAAGGACTAATCCCTGCATTCGACACAACAAGAAGGCATGCCGGCATCACGATTGTGGCCACTACGTTCTTTTGACCTCAACTCTTATTTGTGAGACTGGACGCCCCATTCCACCGGAGCCACTCCAACCCTGGATTGAGGTCAGTGCATGCGTTGCGTGCTTTAAATATGTTGTTCAGTTGCTTTTGTTCTTAGTTCTTCctttctgtttaaattttattctttttacaTTTCATAGATTCATATGCTATTCACTGCCCATGTTACAAGCTCAGCCCAGTCGCTGTGTCAAACTCGCTACCGTAAAGTTTTGA

Transcript

ENSXFYT00000027357

Protein

Uniprot

Uniprot term	Description
Q6XHB2	Probable serine/threonine-protein kinase roco4 OS=Dictyostelium discoideum OX=44689 GN=roco4 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08477	Roc	Ras of Complex, Roc, domain of DAPkinase	Domain	Interproscan
PF13424	TPR_12	Tetratricopeptide repeat	Repeat	Interproscan
PF16095	COR	C-terminal of Roc, COR, domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036388	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR019734	Repeat	Tetratricopeptide repeat	Interproscan
IPR052386	Family	G-protein-signaling modulator	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR032171	Domain	C-terminal of Roc (COR) domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45954	LD33695P	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0000132	Biological Process	establishment of mitotic spindle orientation	Interproscan
GO:0001965	Molecular Function	G-protein alpha-subunit binding	Interproscan
GO:0005092	Molecular Function	GDP-dissociation inhibitor activity	Interproscan
GO:0005938	Cellular Component	cell cortex	Interproscan