Gene detail

Detailed information of ENSXFYP00000027428.1 in Duncanopsammia axifuga

Genomic Location: not available for this species
NR annotation: XP_027047351.1, FACT complex subunit SPT16-like isoform X1 [Pocillopora damicornis]
Species Duncanopsammia axifuga · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9Y5B9	FACT complex subunit SPT16 OS=Homo sapiens OX=9606 GN=SUPT16H PE=1 SV=1
Q920B9	FACT complex subunit SPT16 OS=Mus musculus OX=10090 GN=Supt16h PE=1 SV=2
Q9W603	FACT complex subunit SPT16 OS=Xenopus laevis OX=8355 GN=supt16h PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003211 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00557 all species →	Peptidase_M24	Metallopeptidase family M24	Domain	Interproscan
PF14826 all species →	FACT-Spt16_Nlob	FACT complex subunit SPT16 N-terminal lobe domain	Domain	Interproscan
PF08644 all species →	SPT16	FACT complex subunit (SPT16/CDC68)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036005 all species →	Homologous_superfamily	Creatinase/aminopeptidase-like	Interproscan
IPR013953 all species →	Domain	FACT complex subunit Spt16 domain	Interproscan
IPR000994 all species →	Domain	Peptidase M24	Interproscan
IPR029148 all species →	Domain	FACT complex subunit Spt16, N-terminal lobe domain	Interproscan
IPR029149 all species →	Homologous_superfamily	Creatinase/Aminopeptidase P/Spt16, N-terminal	Interproscan
IPR033825 all species →	Domain	FACT complex subunit Spt16, peptidase M24-like domain	Interproscan
IPR040258 all species →	Family	FACT complex subunit Spt16	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13980 all species →	CDC68 RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006368 all species →	Biological Process	transcription elongation by RNA polymerase II	Interproscan
GO:0031491 all species →	Molecular Function	nucleosome binding	Interproscan
GO:0035101 all species →	Cellular Component	FACT complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSXFYP00000027428.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.