Gene detail

Detailed information of ENSXFYP00000027944.1 in Duncanopsammia axifuga

Genomic Location: not available for this species
NR annotation: CAH3147913.1, unnamed protein product, partial [Porites lobata]
Species Duncanopsammia axifuga · all data for this species · gene families

Sequence

CDS

ENSXFYT00000031316

ATGGCGGCAACCGAAACTGCAAGTGAAACCTGTtcaccaaacgacaacaacagCCCACCATCACTCAGTATTACTATTCCAAAGGCAAACGATCTTAATATTTCTTTAAAGCGTTGGGAAGATGTCAAGCTACCAATAGACATTCTGCTATTGGCCGTGAAGGACTGCGAATTTTTAAGCTGTTATTACTTTATGAGCGATGTCTTTCGAAGCTACACCAGAACTCTTGGCTATGTTTACTTCGGAAACATGGGCAAAAATGGCGATCAAAAACTGAAAGTCGCTTTGATGACACGTCTGGAAAGCGGTGGGGAGCTCGAAGGCGCCGCGAGCGTGTTGACAAAAGCCGTTGACGTTTTACAACCAAAGGCGCTGCTCTGTGTTGGTTCTTGTAGTGGCTTGCATCGCGATAAAACCAAGCTAGGAGACGTGGTGGTTTCGGCCAAGTTGACCACGTATGCTCAACGAAGAGTGACGAGGAATGGAGTGGAGTTTTGCGGCCTTACGACGCCTGTAAGCAGAGAGATGTCCCGCTTGGTAAGACAGGCTGGTTTTGGGTGGAAAGCGCCATTAGAGAACCCGGAAGTCGGCGAAGTGAAAGTGCATCGCGATGGCGAGTTCTTGAGCGGACCAGAGCAGGTTGAATCGAGCTGCCGACGCGATGAACTCGTTCAGTTATACCCCAACGCTATTGCGGTTGAACTGGATGGCGATGGTGTTTTTGCAGCAGCCAATGATCTGAAAACAGAGTGGGTTGTCATCAAGGGGATCTCTTGTTATGCAGATTGCAGTGCATCACTGACTGAAGACTGGGTTCCATATGCATGTACCATGGCAGCTTCAGTTATGAACAACATTCTAAGTGAACCTGCTGTTTTTGAACAGTGGCCTCACTACCAGAGTAACAGTAACTGCCAAAGACCTAACACACGGAATGGAGGAAGTTGTCCAACAGTGCAACCACAAGGTGAAAGTTCCCAAATCCCCTTGTATCAGGTCAGACAAAATGAAAGCTTGAGTGAGGGACAACTTTCAACACAGCAAGTTAGACCACTAATTAGAGATGGGAATGCAGGCACCTTATTTGGAAGCGTGTTGCAGACTTTTGCTGGAAACTGCGACTCTGGCCAGGACATAGCACTTACAAAAGCCCTTGAAGAATCTCTCAAACCTTATGGAGTATTTGAAACTGAGGAACAGCTCCAACACAGGATGGTTGTTCTTGGAAAACTGAATTCTTTAGTTAAACAATGGATCATAGATATCAGTTTAAAAAAGAACATGCCAGAATCTGTAGTAAACTTAGTTGGTGGGAAAATCTTGACCTTTGGTTCTTACAGACTTGGTGTACACATCAAAGGGTCTGATATCAACACACTCCTGGTTGCTCCTCGTCACGTTGAACGTTCTGATTTCTTTGGAACATTTTATGACATTCTCAAAGATAATGAAGATGTTAAGAAATTAAGGGCAGTTGAAAATACATTTGTTCCTGTCATCAACATGGTGTTTTGCAATATAGAGATGGACTTGCTGTTTGCACGACTAGCTCTTCCTGAGGTCCCAGATGACTTGAGTCTTCTAGATGAGAGCCTTCTTAAAAACATGGATCCCAAGTGTGTCAGAAGTTTAAAtgGTCGTCGTGACACAGATGAGATTCTACACTTGGTACCCAACATAGAAAACTTTCGACTTACATTAAGAGCGGTCAAATTATGGGCAAAAAAACGTGGAATCTACTCCAGTGTGTTAGGTTTTCTTGGTGGTGTGTCATGGGCGATATTAGTGGCTCGAACGTGCCAGTTGTATCCAAATGCTGTGGCATCTACTCTTATCCAAAAATTCTTtcttgttttttcaaagtgGGAGTGGCCAAATCCAGTCTTGCTAAAGAATATTCCTCCACCCAGGGAAAACAAACTGGGATTTCAAGTCTGGGATCCAAGGactAATCCAGCACACCGTTATGACTTGATGCCAATCATAACACCGGCTTATCCCCAGCGGAACTCTACATTCAATGTGTCGATGTCAACCAGATCTATCATGAAAGAAGAATTTGACATTGGCCTGAAAATTACAAGTGATGCGTTGATTGGCGAGTCATCTTGGGATGCATTGTTTCAACCGCCCAACTTCTTTAGCAAATACAAACATTACATTGTGTTAAGTGCCTTATCAAACTGTGAAGAGGATCACCTTGAATGgaTTGGTTTAGTCCAGTCCAAGGTCAGAATACTTACAAGAAACCTGGAGAATACTCCGTTTGTTTTGCTAGCTCACGTCCAACCAAAGTCATTTCCTGCATTGGAACCAGACAAGGCTGCCCCTACCACCAGATGGTTTATCGGATTACAGTTTGAGAAAAGAGAAAATGTGAACATCGATTTGACTGGAGCCATTCAGATGTTTACAGATACTGttcattcTCAAGCTCAAGCAGCCAAAATGTTTAAGGAGGGCATGAGAATAGAAACAAAGCATGTAAAAAAGAAGCATCTCAGTGAATATTTGCCATCAAGTGTTCTTAAAcagaaaaagagaagttctgTTGCACCATCAGAAGCCAAAAAAGAGGGGGCAGTTGGGGTGACAGCTAAAGCAGATGGTAAAGGAGATGTGTCGCTTAATTCAACACTCAGTGCCAGTGATTTGAGCCTGGATGTTACCGCAGAAACCATCAATGATAGCGCAGACTGGATAAGCAGTGGGAAAAACTATGATGAGACAGCTGTTGTTAGTAGTTCAGACGACAAAAAGGTGACTGCAGACCCTGATGCGACATCATCAGTTTCAACAGTCGGCGAAGTGATGTCATCAGATACAACTGCAGTTCCTGCTCAGCCCTCAGCAGTTTCTCAAGACAAGCCTGCAGGATTAAAGAGACCAGGTTCTCCCACAGAATCTACGAGCAAAAAGCCTCGAGTGGGCGACATAGATTTCATGGCGACCAGTTCAGTAAATTCGCTAAACGGTGAAAAGGGAAAGAAAAGGCCCAATTCTACTGTTGATGAAATTCCACAGAAAAAGATAAAAGTAGAGCAGAACAAAACGTCAGGACAATCTTCTAACACAAAAGATACAAAAGATGGAGAAATGGGGAATCCGACTGAGGTAAGGGGTCAAGAGAAATGTGAACCGAGCGACAGCAAGGGACCTCCGACGAATGAAAACAGCAGAAAAGAAGACATAACCAAACCAGAGGAGTCTGAGAGAGACTGTAAAAAGATCGATATCGCCGACTga

Transcript

ENSXFYT00000031316

GAGATCAGCGATCCACGCGCGATCACCACGCGAAAAACCTCGTTATGCTGCCTTCGGCCCGACAAATTTAtaaacctcgcttcgcgaggaaaaaGCTTACGGCCGATTATTTGAACGAAATTAATATGCGATAGTTAGCGTCACGCTAACTATCGCTAACTGCCAGCTGAACAGTAGAATCGCGGTCGCGAGGTAACACGATACCTTTTCTTGTATCCCATTACCAATTTAAACCATGGTACTGTGCGTAAAAATTGACGCCTTCATAGCTCAAACTTTTGCCCGTGATCTGAGTTGTGATGGCGGCAACCGAAACTGCAAGTGAAACCTGTtcaccaaacgacaacaacagCCCACCATCACTCAGTATTACTATTCCAAAGGCAAACGATCTTAATATTTCTTTAAAGCGTTGGGAAGATGTCAAGCTACCAATAGACATTCTGCTATTGGCCGTGAAGGACTGCGAATTTTTAAGCTGTTATTACTTTATGAGCGATGTCTTTCGAAGCTACACCAGAACTCTTGGCTATGTTTACTTCGGAAACATGGGCAAAAATGGCGATCAAAAACTGAAAGTCGCTTTGATGACACGTCTGGAAAGCGGTGGGGAGCTCGAAGGCGCCGCGAGCGTGTTGACAAAAGCCGTTGACGTTTTACAACCAAAGGCGCTGCTCTGTGTTGGTTCTTGTAGTGGCTTGCATCGCGATAAAACCAAGCTAGGAGACGTGGTGGTTTCGGCCAAGTTGACCACGTATGCTCAACGAAGAGTGACGAGGAATGGAGTGGAGTTTTGCGGCCTTACGACGCCTGTAAGCAGAGAGATGTCCCGCTTGGTAAGACAGGCTGGTTTTGGGTGGAAAGCGCCATTAGAGAACCCGGAAGTCGGCGAAGTGAAAGTGCATCGCGATGGCGAGTTCTTGAGCGGACCAGAGCAGGTTGAATCGAGCTGCCGACGCGATGAACTCGTTCAGTTATACCCCAACGCTATTGCGGTTGAACTGGATGGCGATGGTGTTTTTGCAGCAGCCAATGATCTGAAAACAGAGTGGGTTGTCATCAAGGGGATCTCTTGTTATGCAGATTGCAGTGCATCACTGACTGAAGACTGGGTTCCATATGCATGTACCATGGCAGCTTCAGTTATGAACAACATTCTAAGTGAACCTGCTGTTTTTGAACAGTGGCCTCACTACCAGAGTAACAGTAACTGCCAAAGACCTAACACACGGAATGGAGGAAGTTGTCCAACAGTGCAACCACAAGGTGAAAGTTCCCAAATCCCCTTGTATCAGGTCAGACAAAATGAAAGCTTGAGTGAGGGACAACTTTCAACACAGCAAGTTAGACCACTAATTAGAGATGGGAATGCAGGCACCTTATTTGGAAGCGTGTTGCAGACTTTTGCTGGAAACTGCGACTCTGGCCAGGACATAGCACTTACAAAAGCCCTTGAAGAATCTCTCAAACCTTATGGAGTATTTGAAACTGAGGAACAGCTCCAACACAGGATGGTTGTTCTTGGAAAACTGAATTCTTTAGTTAAACAATGGATCATAGATATCAGTTTAAAAAAGAACATGCCAGAATCTGTAGTAAACTTAGTTGGTGGGAAAATCTTGACCTTTGGTTCTTACAGACTTGGTGTACACATCAAAGGGTCTGATATCAACACACTCCTGGTTGCTCCTCGTCACGTTGAACGTTCTGATTTCTTTGGAACATTTTATGACATTCTCAAAGATAATGAAGATGTTAAGAAATTAAGGGCAGTTGAAAATACATTTGTTCCTGTCATCAACATGGTGTTTTGCAATATAGAGATGGACTTGCTGTTTGCACGACTAGCTCTTCCTGAGGTCCCAGATGACTTGAGTCTTCTAGATGAGAGCCTTCTTAAAAACATGGATCCCAAGTGTGTCAGAAGTTTAAAtgGTCGTCGTGACACAGATGAGATTCTACACTTGGTACCCAACATAGAAAACTTTCGACTTACATTAAGAGCGGTCAAATTATGGGCAAAAAAACGTGGAATCTACTCCAGTGTGTTAGGTTTTCTTGGTGGTGTGTCATGGGCGATATTAGTGGCTCGAACGTGCCAGTTGTATCCAAATGCTGTGGCATCTACTCTTATCCAAAAATTCTTtcttgttttttcaaagtgGGAGTGGCCAAATCCAGTCTTGCTAAAGAATATTCCTCCACCCAGGGAAAACAAACTGGGATTTCAAGTCTGGGATCCAAGGactAATCCAGCACACCGTTATGACTTGATGCCAATCATAACACCGGCTTATCCCCAGCGGAACTCTACATTCAATGTGTCGATGTCAACCAGATCTATCATGAAAGAAGAATTTGACATTGGCCTGAAAATTACAAGTGATGCGTTGATTGGCGAGTCATCTTGGGATGCATTGTTTCAACCGCCCAACTTCTTTAGCAAATACAAACATTACATTGTGTTAAGTGCCTTATCAAACTGTGAAGAGGATCACCTTGAATGgaTTGGTTTAGTCCAGTCCAAGGTCAGAATACTTACAAGAAACCTGGAGAATACTCCGTTTGTTTTGCTAGCTCACGTCCAACCAAAGTCATTTCCTGCATTGGAACCAGACAAGGCTGCCCCTACCACCAGATGGTTTATCGGATTACAGTTTGAGAAAAGAGAAAATGTGAACATCGATTTGACTGGAGCCATTCAGATGTTTACAGATACTGttcattcTCAAGCTCAAGCAGCCAAAATGTTTAAGGAGGGCATGAGAATAGAAACAAAGCATGTAAAAAAGAAGCATCTCAGTGAATATTTGCCATCAAGTGTTCTTAAAcagaaaaagagaagttctgTTGCACCATCAGAAGCCAAAAAAGAGGGGGCAGTTGGGGTGACAGCTAAAGCAGATGGTAAAGGAGATGTGTCGCTTAATTCAACACTCAGTGCCAGTGATTTGAGCCTGGATGTTACCGCAGAAACCATCAATGATAGCGCAGACTGGATAAGCAGTGGGAAAAACTATGATGAGACAGCTGTTGTTAGTAGTTCAGACGACAAAAAGGTGACTGCAGACCCTGATGCGACATCATCAGTTTCAACAGTCGGCGAAGTGATGTCATCAGATACAACTGCAGTTCCTGCTCAGCCCTCAGCAGTTTCTCAAGACAAGCCTGCAGGATTAAAGAGACCAGGTTCTCCCACAGAATCTACGAGCAAAAAGCCTCGAGTGGGCGACATAGATTTCATGGCGACCAGTTCAGTAAATTCGCTAAACGGTGAAAAGGGAAAGAAAAGGCCCAATTCTACTGTTGATGAAATTCCACAGAAAAAGATAAAAGTAGAGCAGAACAAAACGTCAGGACAATCTTCTAACACAAAAGATACAAAAGATGGAGAAATGGGGAATCCGACTGAGGTAAGGGGTCAAGAGAAATGTGAACCGAGCGACAGCAAGGGACCTCCGACGAATGAAAACAGCAGAAAAGAAGACATAACCAAACCAGAGGAGTCTGAGAGAGACTGTAAAAAGATCGATATCGCCGACTgaggaaaaaatgaaacaaagccagTTTAAT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P25500	Poly(A) polymerase alpha OS=Bos taurus OX=9913 GN=PAPOLA PE=1 SV=3
P51003	Poly(A) polymerase alpha OS=Homo sapiens OX=9606 GN=PAPOLA PE=1 SV=4
Q61183	Poly(A) polymerase alpha OS=Mus musculus OX=10090 GN=Papola PE=1 SV=4

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001969 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01048 all species →	PNP_UDP_1	Phosphorylase superfamily	Domain	Interproscan
PF04926 all species →	PAP_RNA-bind	Poly(A) polymerase predicted RNA binding domain	Domain	Interproscan
PF04928 all species →	PAP_central	Poly(A) polymerase central domain	Domain	Interproscan
PF20750 all species →	PAP_NTPase	Poly(A) polymerase nucleotidyltransferase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR035994 all species →	Homologous_superfamily	Nucleoside phosphorylase superfamily	Interproscan
IPR043519 all species →	Homologous_superfamily	Nucleotidyltransferase superfamily	Interproscan
IPR000845 all species →	Domain	Nucleoside phosphorylase domain	Interproscan
IPR007010 all species →	Domain	Poly(A) polymerase, RNA-binding domain	Interproscan
IPR007012 all species →	Domain	Poly(A) polymerase, central domain	Interproscan
IPR048840 all species →	Domain	Poly(A) polymerase, nucleotidyltransferase domain	Interproscan
IPR011068 all species →	Homologous_superfamily	Nucleotidyltransferase, class I-like, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10682 all species →	POLY A POLYMERASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan
GO:0009116 all species →	Biological Process	nucleoside metabolic process	Interproscan
GO:0004652 all species →	Molecular Function	obsolete polynucleotide adenylyltransferase activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006378 all species →	Biological Process	obsolete mRNA polyadenylation	Interproscan
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:1990817 all species →	Molecular Function	poly(A) RNA polymerase activity	Interproscan
GO:0016779 all species →	Molecular Function	nucleotidyltransferase activity	Interproscan
GO:0031123 all species →	Biological Process	RNA 3'-end processing	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSXFYP00000027944.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.