Gene detail

Detailed information of ENSXFYP00000039328.1 in Duncanopsammia axifuga

Genomic Location: not available for this species
NR annotation: KAJ7378478.1, E3 ubiquitin-protein ligase E3D [Desmophyllum pertusum]
Species Duncanopsammia axifuga · all data for this species · gene families

Sequence

CDS

Transcript

ENSXFYT00000043699

gacgaatTAAACGTTGTTCCGATTTGGTGCGATGTTGGAAAAAACTTAAATGCAGTTTCTTTGGTGGTTAGTTTAGGACGTTTtacaaaaggaaaactaacatgTGGTggaaaatcaaagcaaatcgTGAGAATTTCTCCTCGAAAATTAATATGTGAGACGGTGGATATAAACAAGGAACGAGATTTGAAGAATGCAGTAGATTATCCAGCTGCATTTAGTGTGATTCCAAGATCATGTACTGGTCTATCAGTGTGTAGAGGGAATGAGATTCAAATGAGGCTTGAGTTTGTATATCATACAAGTGACTGCCAAGAGGGGGTCTCTAACAATCATTTGAAGGAAGAGTTAATAGAATTAAGGAAAGGGTGCCACAGTGTTTGTTGTCAGATTTGTGGATCTGCCATTTTATTGCCTGAGAGGCAGTTTAAAAGAGTTCTGGAATTACCATCAGAAAACTGGCTTGAACTTGCTGAAGACTGGTGCTGCCATGGCAGCAGTCATCTCATGTCTGTTGCAGGGGTTCTTGAACCTGGTGAAGATGACTGCTTTGTAGGAGAATACTACATCAAGGTGCACCCTGCAGCTACAGAGCCAGGAAATGTAAAGATTCTACTTGGAGAGGATCatgacaaaataaaatgttgtcGATGCAATGCCACACTAGGAACTGTTACCATCAAGGACACAAGTCCTGACTTATTAGAATTAAACAATGTAGGCAGCATATATCTCTATAAACACAGGATCAGCCTACGACAGAGTAACTTGTTCAGGTCCTATTGCATTGAGACCTTTATTTCTAGTTATTTAATTTCCAAGTCCCAAGGTGTAGTGAACTTCAGGTTTCTTGTTCAAGAAAACATGCACAATGGAAAGAAAAGAGCCCATGCCTGTctttggctttttaacgcaGACGCTGCCGTGGTAACAAATGTTGAACATGTAAACTTCAGCTCTTTAACAAGAACAGATAAACCTGAACTATATTCTGTCAAGAACAAAGCCAAATACCTACATGTGCTGAAGATTCTTTACAAGATTGCACCAATTTTCGGTGGAAGAAATTGGGATGACGAGGTAGCTACTTGGCAAAAGAATCCCGCTGTTCAGCATCTTACTTTCACGAAGGAGACTTGTTTACATCTGATTCTTCTTCTATCAGCGAGTACAAACACTATAGCGCCTTCCTTGAGAGACGTGAGGGGGTTTAAGGTTGGCTATTTGAAAACAATGAACACCTAGCACGTGAATTTTTGAGAACTTAGCATCTCGCCGATTAGAAGCCAACAGTGAATCACGTCGTCAGCGTTTGAGGATCATGGACTATGGACGATGTATGATGACAATGGATCTTGGAATATGAGCATGGAGCATGGAGCATGGAGCATGGAGCATGGAGCATGGAGCATGGAGCATGGAGCATGGAGCATGGAGCATGGAGCATGAAGCATGAAGCATGGAGCAGGGGCATGGAGCAGGGGTATGGCGCAGACTGGCGCCGCCATCATGATAAGGACAAAGAAAACCGAATATTGCGAAAATATAACTGTTGATTGATGGGTGACAGTCAGAAGGGTTTGTGCTAAAATATATAAGGAGGACGCCCTGTCAGAGACACCAAATCATGTAATTTTTAACACTTTTGATACCTTTGATAACAGTTGCTTTGCACCTGTAcaagttttttgaaaaatgagttGCCAAAATCATGCTCCtctattttgaaataaaaatttcgCAGGGAAGAAATTCTTGGATTGCTTTTATACTTCATCAAGCGTATGATGAAAAAAAAGAGCGCCTACACTACTACGCAAAGCCTGCTTCCCAGTCAAGAAATGAGACAACTTGTTGAGCAGACTGGCGCCGTATAGTTACCATCTTGACTGCATCATGATAAGCACAAGCAAAAACGAACAAAACGATCTAGCGAAAACATGACTTGTGAGTGATGCGTGACAATCAGAAGGATTTGTGCTGAAATATGTAAGGAGGACGCCCTGTCAGAGACACCAAATCATGTAACTTTCAACACTTTTGATACCTTTGATAATAGTTGCTTTGTACCCGTacaattgttttgaaaaatgagtTGCCAAAAATCATACCTctcaattttgaaataaaaatttcgCAGG

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008387 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF09814 all species →	HECT_2	HECT-like Ubiquitin-conjugating enzyme (E2)-binding	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019193 all species →	Family	Ubiquitin-conjugating enzyme E2-binding protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31531 all species →	E3 UBIQUITIN-PROTEIN LIGASE E3D FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000151 all species →	Cellular Component	ubiquitin ligase complex	Interproscan
GO:0000209 all species →	Biological Process	protein polyubiquitination	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0006513 all species →	Biological Process	protein monoubiquitination	Interproscan
GO:0030332 all species →	Molecular Function	cyclin binding	Interproscan
GO:0031624 all species →	Molecular Function	ubiquitin conjugating enzyme binding	Interproscan
GO:0043161 all species →	Biological Process	proteasome-mediated ubiquitin-dependent protein catabolic process	Interproscan
GO:0051865 all species →	Biological Process	protein autoubiquitination	Interproscan
GO:0061630 all species →	Molecular Function	ubiquitin protein ligase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSXFYP00000039328.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.